Molecular analyses of the possible RNA-binding protein gene located in the human leukocyte antigen (HLA)--DR subregion

Gene. 1999 Nov 15;240(1):125-32. doi: 10.1016/s0378-1119(99)00422-9.

Abstract

We have previously found the sequence having potential for encoding a new protein in the human leukocyte antigen (HLA) class II region. The predicted amino acid sequence showed a significant sequence homology to the Xenopus double-stranded RNA-binding protein (Xlrbp) and the human cellular protein bound to the transactivation response (TAR) of human immunodeficiency virus type-1 (HIV-1) RNA (TRBP). Reverse transcription-polymerase chain reaction (RT-PCR) with poly(A)(+) RNA prepared from human peripheral lymphocytes and direct sequencing analyses in this study showed that the transcripts of the gene encoding the putative RNA-binding protein occurred in human cells: the gene was provisionally named Homo sapiens RNA-binding protein (hsRBP). From the result of Southern blot analyses, it appears that multiple copies of hsRBP are present in the human genome. Together with the known cDNAs having a high sequence homology to hsRBP, the data presented here suggest that the multigene family of the double-stranded RNA-binding protein exists in the human genome.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Blotting, Southern
  • DNA / chemistry
  • DNA / genetics*
  • Gene Dosage
  • Gene Expression Regulation
  • Genome, Human
  • HLA-DR Antigens / genetics*
  • Histocompatibility Antigens Class II / genetics
  • Humans
  • Lymphocytes / cytology
  • Lymphocytes / metabolism
  • Molecular Sequence Data
  • Multigene Family / genetics
  • Protein Biosynthesis
  • RNA / genetics
  • RNA, Messenger / genetics
  • RNA-Binding Proteins / genetics*
  • RNA-Binding Proteins / physiology
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Sequence Homology, Nucleic Acid
  • Transcription, Genetic

Substances

  • HLA-DR Antigens
  • Histocompatibility Antigens Class II
  • RNA, Messenger
  • RNA-Binding Proteins
  • RNA
  • DNA