High prevalence of GB virus C/hepatitis G virus in Kinshasa, Democratic Republic of Congo: a phylogenetic analysis

J Med Virol. 2000 Feb;60(2):159-65.

Abstract

A prevalence of 10.3% of GB virus C (GBV-C)/hepatitis G virus (HGV) carriers was found in 97 pregnant women from Kinshasa, Congo (formerly Zaire), while prevalences of 1%, 4.1%, and 0% were found for hepatitis C virus, human immunodeficiency virus, and human T-lymphotropic virus respectively. Phylogenetic analysis of the ten GBV-C/HGV positives based on the 5' non-coding region using three different methods identified consistently three GBV-C/HGV genotypes. Four main clades were found within the type 1 sequences. All the Congolese isolates are GBV-C/HGV type 1 in two different clades. The clustering of seven Congolese isolates was inconsistent in different methods. Further likelihood-mapping analysis showed a well-resolved phylogeny, confirming the clustering of the seven Congolese isolates with a Belgian strain representing a new clade in the GBV-C/HGV type 1 sequences.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Deltaretrovirus Infections / complications
  • Deltaretrovirus Infections / epidemiology
  • Democratic Republic of the Congo / epidemiology
  • Female
  • Flaviviridae / classification
  • Flaviviridae / genetics*
  • HIV Infections / complications
  • HIV Infections / epidemiology
  • Hepatitis C / complications
  • Hepatitis C / epidemiology
  • Hepatitis, Viral, Human / complications
  • Hepatitis, Viral, Human / epidemiology*
  • Hepatitis, Viral, Human / virology
  • Humans
  • Phylogeny
  • Polymerase Chain Reaction
  • Pregnancy
  • Prevalence
  • RNA, Viral / analysis
  • Sequence Alignment
  • Viral Envelope Proteins / genetics*

Substances

  • RNA, Viral
  • Viral Envelope Proteins
  • envelope protein E1, GB virus C