Synthesis of a novel hepatitis C virus protein by ribosomal frameshift

EMBO J. 2001 Jul 16;20(14):3840-8. doi: 10.1093/emboj/20.14.3840.

Abstract

Hepatitis C virus (HCV) is an important human pathogen that affects approximately 100 million people worldwide. Its RNA genome codes for a polyprotein, which is cleaved by viral and cellular proteases to produce at least 10 mature viral protein products. We report here the discovery of a novel HCV protein synthesized by ribosomal frameshift. This protein, which we named the F protein, is synthesized from the initiation codon of the polyprotein sequence followed by ribosomal frameshift into the -2/+1 reading frame. This ribosomal frameshift requires only codons 8-14 of the core protein-coding sequence, and the shift junction is located at or near codon 11. An F protein analog synthesized in vitro reacted with the sera of HCV patients but not with the sera of hepatitis B patients, indicating the expression of the F protein during natural HCV infection. This unexpected finding may open new avenues for the development of anti-HCV drugs.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Base Sequence
  • Codon
  • DNA, Viral
  • Frameshifting, Ribosomal*
  • Genome, Viral
  • Hepacivirus / genetics
  • Hepacivirus / metabolism*
  • Molecular Sequence Data
  • Open Reading Frames
  • Viral Core Proteins / chemistry
  • Viral Core Proteins / genetics*

Substances

  • Codon
  • DNA, Viral
  • Viral Core Proteins
  • hepatitis C protein F, Hepatitis C virus