Enterobacterial repetitive intergenic consensus sequence-based PCR (ERIC-PCR); its ability to differentiate Streptococcus pyogenes strains and applicability to the study of outbreaks of streptococcal infection

Tohoku J Exp Med. 2001 Aug;194(4):205-12. doi: 10.1620/tjem.194.205.

Abstract

We evaluated the ability of enterobacterial repetitive intergenic consensus sequence-based PCR (ERIC-PCR) to differentiate 95 Streptococcus pyogenes strains with M or T serotypes isolated from sporadic streptococcal infections as compared with M or T serotypings and pulsed-field gel electrophoresis (PFGE). Although the ERIC-PCR had less discriminatory power, defined as the ability to divide the strains with the same serotypes into the different sub-types, than PFGE, it consistently classified the strains into 16 patterns with a high correlation with M or T serotyping. The PCR method further discriminated 4 M or T serotypes into sub-types. The application of ERIC-PCR to 5 outbreaks of streptococcal infection produced the results that agreed closely with those of T serotyping and PFGE. ERIC-PCR has sufficient discriminatory power and is a quick and relatively easy technique, making it useful for routine epidemiological investigations.

Publication types

  • Comparative Study
  • Evaluation Study

MeSH terms

  • Bacterial Typing Techniques
  • Consensus Sequence
  • DNA, Bacterial / genetics
  • DNA, Bacterial / isolation & purification
  • Disease Outbreaks*
  • Electrophoresis, Gel, Pulsed-Field
  • Humans
  • Japan / epidemiology
  • Polymerase Chain Reaction / methods*
  • Repetitive Sequences, Nucleic Acid
  • Serotyping
  • Streptococcal Infections / epidemiology*
  • Streptococcal Infections / microbiology*
  • Streptococcus pyogenes / classification*
  • Streptococcus pyogenes / genetics*
  • Streptococcus pyogenes / isolation & purification

Substances

  • DNA, Bacterial