Abstract
We report on a series of N-pyrazole, N'-aryl ureas and their mode of binding to p38 mitogen activated protein kinase. Importantly, a key binding domain that is distinct from the adenosine 5'-triphoshate (ATP) binding site is exposed when the conserved activation loop, consisting in part of Asp168-Phe169-Gly170, adopts a conformation permitting lipophilic and hydrogen bonding interactions between this class of inhibitors and the protein. We describe the correlation of the structure-activity relationships and crystallographic structures of these inhibitors with p38. In addition, we incorporated another binding pharmacophore that forms a hydrogen bond at the ATP binding site. This modification affords significant improvements in binding, cellular, and in vivo potencies resulting in the selection of 45 (BIRB 796) as a clinical candidate for the treatment of inflammatory diseases.
MeSH terms
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Animals
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Anti-Inflammatory Agents, Non-Steroidal / chemical synthesis*
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Anti-Inflammatory Agents, Non-Steroidal / chemistry
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Anti-Inflammatory Agents, Non-Steroidal / pharmacology
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Binding, Competitive
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Cell Line
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Chromatography, High Pressure Liquid
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Crystallography, X-Ray
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Enzyme Inhibitors / chemical synthesis*
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Enzyme Inhibitors / chemistry
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Enzyme Inhibitors / pharmacology
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Female
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Fluorescence
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Humans
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Lipopolysaccharides / pharmacology
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Mice
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Mice, Inbred BALB C
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Mitogen-Activated Protein Kinases / antagonists & inhibitors*
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Models, Molecular
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Naphthalenes / chemical synthesis*
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Naphthalenes / chemistry
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Naphthalenes / pharmacology
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Protein Binding
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Pyrazoles / chemical synthesis*
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Pyrazoles / chemistry
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Pyrazoles / pharmacology
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Structure-Activity Relationship
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Tumor Necrosis Factor-alpha / biosynthesis
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Urea / analogs & derivatives*
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Urea / chemical synthesis*
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Urea / chemistry
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Urea / pharmacology
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p38 Mitogen-Activated Protein Kinases
Substances
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Anti-Inflammatory Agents, Non-Steroidal
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Enzyme Inhibitors
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Lipopolysaccharides
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Naphthalenes
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Pyrazoles
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Tumor Necrosis Factor-alpha
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Urea
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Mitogen-Activated Protein Kinases
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p38 Mitogen-Activated Protein Kinases
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doramapimod