Crystal structure of biotin synthase, an S-adenosylmethionine-dependent radical enzyme

Science. 2004 Jan 2;303(5654):76-9. doi: 10.1126/science.1088493.

Abstract

The crystal structure of biotin synthase from Escherichia coli in complex with S-adenosyl-L-methionine and dethiobiotin has been determined to 3.4 angstrom resolution. This structure addresses how "AdoMet radical" or "radical SAM" enzymes use Fe4S4 clusters and S-adenosyl-L-methionine to generate organic radicals. Biotin synthase catalyzes the radical-mediated insertion of sulfur into dethiobiotin to form biotin. The structure places the substrates between the Fe4S4 cluster, essential for radical generation, and the Fe2S2 cluster, postulated to be the source of sulfur, with both clusters in unprecedented coordination environments.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Motifs
  • Binding Sites
  • Biotin / analogs & derivatives*
  • Biotin / chemistry*
  • Biotin / metabolism
  • Catalysis
  • Crystallization
  • Crystallography, X-Ray
  • Dimerization
  • Escherichia coli / enzymology*
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / metabolism*
  • Hydrogen / chemistry
  • Hydrogen Bonding
  • Iron / chemistry
  • Ligands
  • Models, Molecular
  • Protein Binding
  • Protein Conformation
  • Protein Folding
  • Protein Structure, Secondary
  • Protein Structure, Tertiary
  • S-Adenosylmethionine / chemistry*
  • S-Adenosylmethionine / metabolism
  • Sulfur / chemistry
  • Sulfurtransferases / chemistry*
  • Sulfurtransferases / metabolism*

Substances

  • Escherichia coli Proteins
  • Ligands
  • Biotin
  • Sulfur
  • desthiobiotin
  • S-Adenosylmethionine
  • Hydrogen
  • Iron
  • Sulfurtransferases
  • biotin synthase, E coli

Associated data

  • PDB/1R30