EDGE: extraction and analysis of differential gene expression

Bioinformatics. 2006 Feb 15;22(4):507-8. doi: 10.1093/bioinformatics/btk005. Epub 2005 Dec 15.

Abstract

EDGE (Extraction of Differential Gene Expression) is an open source, point-and-click software program for the significance analysis of DNA microarray experiments. EDGE can perform both standard and time course differential expression analysis. The functions are based on newly developed statistical theory and methods. This document introduces the EDGE software package.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Algorithms*
  • Cluster Analysis
  • Computer Graphics*
  • Gene Expression Profiling / methods*
  • Oligonucleotide Array Sequence Analysis / methods*
  • Pattern Recognition, Automated / methods*
  • Software*
  • User-Computer Interface*