A two-step, PU.1-dependent mechanism for developmentally regulated chromatin remodeling and transcription of the c-fms gene

Mol Cell Biol. 2007 Feb;27(3):878-87. doi: 10.1128/MCB.01915-06. Epub 2006 Nov 20.

Abstract

Hematopoietic stem cells and multipotent progenitors exhibit low-level transcription and partial chromatin reorganization of myeloid cell-specific genes including the c-fms (csf1R) locus. Expression of the c-fms gene is dependent on the Ets family transcription factor PU.1 and is upregulated during myeloid differentiation, enabling committed macrophage precursors to respond to colony-stimulating factor 1. To analyze molecular mechanisms underlying the transcriptional priming and developmental upregulation of the c-fms gene, we have utilized myeloid progenitors lacking the transcription factor PU.1. PU.1 can bind to sites in both the c-fms promoter and the c-fms intronic regulatory element (FIRE enhancer). Unlike wild-type progenitors, the PU.1(-/-) cells are unable to express c-fms or initiate macrophage differentiation. When PU.1 was reexpressed in mutant progenitors, the chromatin structure of the c-fms promoter was rapidly reorganized. In contrast, assembly of transcription factors at FIRE, acquisition of active histone marks, and high levels of c-fms transcription occurred with significantly slower kinetics. We demonstrate that the reason for this differential activation was that PU.1 was required to promote induction and binding of a secondary transcription factor, Egr-2, which is important for FIRE enhancer activity. These data suggest that the c-fms promoter is maintained in a primed state by PU.1 in progenitor cells and that at FIRE PU.1 functions with another transcription factor to direct full activation of the c-fms locus in differentiated myeloid cells. The two-step mechanism of developmental gene activation that we describe here may be utilized to regulate gene activity in a variety of developmental pathways.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Chromatin Assembly and Disassembly* / genetics
  • Deoxyribonuclease I / metabolism
  • Early Growth Response Protein 2 / metabolism
  • Enhancer Elements, Genetic
  • Gene Expression Regulation, Developmental*
  • Genes, fms / genetics*
  • Histones / metabolism
  • Kinetics
  • Methylation
  • Mice
  • Models, Genetic
  • Molecular Sequence Data
  • NIH 3T3 Cells
  • Promoter Regions, Genetic / genetics
  • Protein Binding
  • Proto-Oncogene Proteins / deficiency
  • Proto-Oncogene Proteins / metabolism*
  • RNA Polymerase II / metabolism
  • TATA-Box Binding Protein / metabolism
  • Trans-Activators / deficiency
  • Trans-Activators / metabolism*
  • Transcription Factors / metabolism
  • Transcription, Genetic / genetics*
  • Transcriptional Activation

Substances

  • Early Growth Response Protein 2
  • Histones
  • Proto-Oncogene Proteins
  • TATA-Box Binding Protein
  • Trans-Activators
  • Transcription Factors
  • proto-oncogene protein Spi-1
  • RNA Polymerase II
  • Deoxyribonuclease I