Molecular origin of the self-assembly of lanreotide into nanotubes: a mutational approach

Biophys J. 2008 Mar 1;94(5):1782-95. doi: 10.1529/biophysj.107.108175. Epub 2007 Nov 9.

Abstract

Lanreotide, a synthetic, therapeutic octapeptide analog of somatostatin, self-assembles in water into perfectly hollow and monodisperse (24-nm wide) nanotubes. Lanreotide is a cyclic octapeptide that contains three aromatic residues. The molecular packing of the peptide in the walls of a nanotube has recently been characterized, indicating four hierarchical levels of organization. This is a fascinating example of spontaneous self-organization, very similar to the formation of the gas vesicle walls of Halobacterium halobium. However, this unique peptide self-assembly raises important questions about its molecular origin. We adopted a directed mutation approach to determine the molecular parameters driving the formation of such a remarkable peptide architecture. We have modified the conformation by opening the cycle and by changing the conformation of a Lys residue, and we have also mutated the aromatic side chains of the peptide. We show that three parameters are essential for the formation of lanreotide nanotubes: i), the specificity of two of the three aromatic side chains, ii), the spatial arrangement of the hydrophilic and hydrophobic residues, and iii), the aromatic side chain in the beta-turn of the molecule. When these molecular characteristics are modified, either the peptides lose their self-assembling capability or they form less-ordered architectures, such as amyloid fibers and curved lamellae. Thus we have determined key elements of the molecular origins of lanreotide nanotube formation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Amino Acids, Aromatic / chemistry
  • Amyloid / chemistry
  • Binding Sites
  • Halobacterium salinarum / chemistry
  • Halobacterium salinarum / metabolism
  • Hydrophobic and Hydrophilic Interactions
  • Lysine / chemistry
  • Microscopy
  • Molecular Sequence Data
  • Mutation*
  • Nanotubes, Peptide / chemistry*
  • Peptides, Cyclic / chemistry*
  • Peptides, Cyclic / genetics
  • Protein Conformation
  • Solutions / chemistry
  • Somatostatin / analogs & derivatives*
  • Somatostatin / chemistry
  • Somatostatin / genetics
  • Spectroscopy, Fourier Transform Infrared
  • Spectrum Analysis, Raman
  • Water / chemistry

Substances

  • Amino Acids, Aromatic
  • Amyloid
  • Nanotubes, Peptide
  • Peptides, Cyclic
  • Solutions
  • Water
  • lanreotide
  • Somatostatin
  • Lysine