The violacein biosynthetic enzyme VioE shares a fold with lipoprotein transporter proteins

J Biol Chem. 2008 Mar 7;283(10):6467-75. doi: 10.1074/jbc.M708573200. Epub 2008 Jan 2.

Abstract

VioE, an unusual enzyme with no characterized homologues, plays a key role in the biosynthesis of violacein, a purple pigment with antibacterial and cytotoxic properties. Without bound cofactors or metals, VioE, from the bacterium Chromobacterium violaceum, mediates a 1,2 shift of an indole ring and oxidative chemistry to generate prodeoxyviolacein, a precursor to violacein. Our 1.21 A resolution structure of VioE shows that the enzyme shares a core fold previously described for lipoprotein transporter proteins LolA and LolB. For both LolB and VioE, a bound polyethylene glycol molecule suggests the location of the binding and/or active site of the protein. Mutations of residues near the bound polyethylene glycol molecule in VioE have identified the active site and five residues important for binding or catalysis. This structural and mutagenesis study suggests that VioE acts as a catalytic chaperone, using a fold previously associated with lipoprotein transporters to catalyze the production of its prodeoxyviolacein product.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Anti-Bacterial Agents / biosynthesis
  • Anti-Bacterial Agents / chemistry
  • Bacterial Outer Membrane Proteins / chemistry*
  • Bacterial Outer Membrane Proteins / genetics
  • Bacterial Outer Membrane Proteins / metabolism
  • Binding Sites / physiology
  • Carrier Proteins / chemistry*
  • Carrier Proteins / genetics
  • Carrier Proteins / metabolism
  • Catalysis
  • Chromobacterium / enzymology*
  • Chromobacterium / genetics
  • Crystallography, X-Ray
  • Cytotoxins / biosynthesis
  • Cytotoxins / chemistry
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism
  • Indoles / chemistry*
  • Indoles / metabolism
  • Molecular Chaperones / chemistry*
  • Molecular Chaperones / genetics
  • Molecular Chaperones / metabolism
  • Mutation
  • Oxidoreductases / chemistry*
  • Oxidoreductases / genetics
  • Oxidoreductases / metabolism
  • Periplasmic Binding Proteins / chemistry*
  • Periplasmic Binding Proteins / genetics
  • Periplasmic Binding Proteins / metabolism
  • Polyethylene Glycols / chemistry
  • Polyethylene Glycols / metabolism
  • Protein Binding / physiology
  • Protein Structure, Tertiary / physiology
  • Structural Homology, Protein

Substances

  • Anti-Bacterial Agents
  • Bacterial Outer Membrane Proteins
  • Carrier Proteins
  • Cytotoxins
  • Escherichia coli Proteins
  • Indoles
  • LolA protein, E coli
  • LolB protein, E coli
  • Molecular Chaperones
  • Periplasmic Binding Proteins
  • Polyethylene Glycols
  • Oxidoreductases
  • violacein

Associated data

  • PDB/3BMZ