Simplified molecular input line entry system-based optimal descriptors: quantitative structure-activity relationship modeling mutagenicity of nitrated polycyclic aromatic hydrocarbons

Chem Biol Drug Des. 2009 May;73(5):515-25. doi: 10.1111/j.1747-0285.2009.00802.x.

Abstract

We developed a new QSAR model, based on the optimal descriptors, calculated with simplified molecular input line entry system. These descriptors are correlated with mutagenic potential for a training set and correlated with this end-point for a test set. Statistical characteristics of the model are n = 28, r 2 = 0.902, q 2 = 0.892, s = 0.554, F = 240 (training set) and n = 20, r 2 = 0.853, q 2 = 0.823, s = 0.702, F = 105 (test set).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Algorithms
  • Internet
  • Models, Molecular
  • Monte Carlo Method
  • Mutagens / chemistry*
  • Mutagens / toxicity
  • Nitrates / chemistry
  • Nitro Compounds / chemistry*
  • Nitro Compounds / toxicity*
  • Polycyclic Aromatic Hydrocarbons / chemistry*
  • Polycyclic Aromatic Hydrocarbons / toxicity*
  • Quantitative Structure-Activity Relationship*
  • Software

Substances

  • Mutagens
  • Nitrates
  • Nitro Compounds
  • Polycyclic Aromatic Hydrocarbons