Corynebacterium deserti sp. nov., isolated from desert sand

Int J Syst Evol Microbiol. 2012 Apr;62(Pt 4):791-794. doi: 10.1099/ijs.0.030429-0. Epub 2011 May 13.

Abstract

A novel coryneform bacterium, designated strain GIMN1.010T, was isolated from a sand sample collected in the desert in the west of China. Cells were Gram-stain-positive, non-spore-forming, catalase-positive, irregular rods. Comparative 16S rRNA gene sequence analysis demonstrated that strain GIMN1.010T belonged to the genus Corynebacterium and was related closely to Corynebacterium glutamicum ATCC 13032T (98.4 % similarity). However, the level of DNA-DNA relatedness between strain GIMN1.010T and C. glutamicum ATCC 13032T was only 22.4±1.72 %, showing that strain GIMN1.010T represented a genomic species distinct from C. glutamicum. On the basis of phenotypic and phylogenetic data, strain GIMN1.010T is considered to represent a novel species of the genus Corynebacterium, for which the name Corynebacterium deserti sp. nov. is proposed. The type strain is GIMN1.010T (=CCTCC AB 2010341T=NRRL B-59552).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Composition
  • China
  • Corynebacterium / classification*
  • Corynebacterium / genetics
  • Corynebacterium / isolation & purification
  • DNA, Bacterial / genetics
  • Desert Climate
  • Fatty Acids / chemistry
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Silicon Dioxide*
  • Soil Microbiology*
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / chemistry

Substances

  • DNA, Bacterial
  • Fatty Acids
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • vitamin MK 8
  • menaquinone 9
  • Silicon Dioxide

Associated data

  • GENBANK/HQ612241