5-Hydroxymethylcytosine-selective oxidation with peroxotungstate

Chem Commun (Camb). 2011 Oct 28;47(40):11231-3. doi: 10.1039/c1cc14782j. Epub 2011 Sep 15.

Abstract

Tungsten oxidation worked as a simple chemical reaction for the effective detection of 5-hydroxymethylcytosine in DNA, distinguishing it from its epigenetic precursors, 5-methylcytosine and unmethylated cytosine. The tungsten-oxidation product obtained from 5-hydroxymethylcytosine was trihydroxylated thymine and was detected as a cleavage band in gel electrophoresis after treatment with hot piperidine.

MeSH terms

  • 5-Methylcytosine / analogs & derivatives
  • Base Sequence
  • Cytosine / analogs & derivatives*
  • Cytosine / chemistry
  • DNA, Single-Stranded / chemistry
  • DNA, Single-Stranded / genetics
  • Oxidation-Reduction
  • Substrate Specificity
  • Tungsten Compounds / chemistry*

Substances

  • DNA, Single-Stranded
  • Tungsten Compounds
  • 5-hydroxymethylcytosine
  • 5-Methylcytosine
  • Cytosine
  • tungstate