Amino acid/water interactions study: a new amino acid scale

J Biomol Struct Dyn. 2014;32(6):959-68. doi: 10.1080/07391102.2013.800994. Epub 2013 Jun 19.

Abstract

Partition ratios of 8 free l-amino acids (Gln, Glu, His, Lys, Met, Ser, Thr, and Tyr) were measured in 10 different polymer/polymer aqueous two-phase systems containing 0.15 M NaCl in 0.01 M phosphate buffer, pH 7.4. The solute-specific coefficients representing the solute dipole/dipole, hydrogen-bonding and electrostatic interactions with the aqueous environment of the amino acids were determined by multiple linear regression analysis using a modified linear solvation energy relationship. The solute-specific coefficients determined in this study together with the solute-specific coefficients reported previously for amino acids with non-polar side-chains where used in a Quantitative Structure/Property Relationship analysis. It is shown that linear combinations of these solute-specific coefficients are correlated well with various physicochemical, structural, and biological properties of amino acids.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids / chemistry*
  • Dextrans / chemistry
  • Hydrogen Bonding
  • Phosphates / chemistry
  • Polyethylene Glycols / chemistry
  • Quantitative Structure-Activity Relationship
  • Regression Analysis
  • Sodium Chloride / chemistry
  • Static Electricity
  • Stereoisomerism
  • Water / chemistry*

Substances

  • Amino Acids
  • Dextrans
  • Phosphates
  • Water
  • Polyethylene Glycols
  • Sodium Chloride
  • sodium phosphate