Cellvibrio diazotrophicus sp. nov., a nitrogen-fixing bacteria isolated from the rhizosphere of salt meadow plants and emended description of the genus Cellvibrio

Int J Syst Evol Microbiol. 2014 Feb;64(Pt 2):481-486. doi: 10.1099/ijs.0.054817-0. Epub 2013 Oct 8.

Abstract

Two Gram-reaction-negative, aerobic, nitrogen-fixing, rod-shaped bacteria, designated strains E20 and E50(T), were isolated from the rhizosphere of salt meadow plants Plantago winteri and Hordeum secalinum, respectively, near Münzenberg, Germany. Based on the 16S rRNA gene sequence analysis both strains E20 and E50(T) are affiliated with the genus Cellvibrio, sharing the highest similarity with Cellvibrio gandavensis LMG 18551(T) (96.4%) and (97.1%), respectively. Strains E20 and E50(T) were oxidase and catalase-positive, grew at a temperature range between 16 and 37 °C and in the presence of 0-5% NaCl (w/v). The DNA G+C contents were 52.1 mol% (E20) and 51.6 mol% (E50(T)). Major fatty acids of strains E20 and E50(T) were summed feature 3 (C16 : 1ω7c and/or iso-C(15 : 0) 2-OH), C(16 : 0), C(18 : 1)ω7c, C(12 : 0), C(18 : 0) and C(12 : 0) 3-OH. The DNA-DNA relatedness of the strains to Cellvibrio gandavensis LMG 18551(T) was 39% for strain E20 and 58% for strain E50(T). The nitrogen fixation capability of strains E20 and E50(T) was confirmed by the acetylene reduction assay. On the basis of our polyphasic taxonomic study, strains E20 and E50(T) represent a novel species of the genus Cellvibrio, for which the name Cellvibrio diazotrophicus is proposed. The type strain of Cellvibrio diazotrophicus is E50(T) ( = LMG 27267(T) = KACC 17069(T)). An emended description of the genus Cellvibrio is proposed based on the capability of fixing nitrogen and growth in presence of up to 5% NaCl (w/v).

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • Cellvibrio / classification*
  • Cellvibrio / genetics
  • Cellvibrio / isolation & purification
  • Fatty Acids / chemistry
  • Germany
  • Hordeum / microbiology
  • Molecular Sequence Data
  • Nitrogen Fixation*
  • Nucleic Acid Hybridization
  • Phylogeny*
  • Plantago / microbiology
  • RNA, Ribosomal, 16S / genetics
  • Rhizosphere*
  • Salt-Tolerant Plants / microbiology*
  • Sequence Analysis, DNA
  • Soil Microbiology*

Substances

  • Fatty Acids
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/JQ922425
  • GENBANK/JQ922426