A short sequence immediately upstream of the internal repeat elements is critical for KSHV LANA mediated DNA replication and impacts episome persistence

Virology. 2014 Jan 5:448:344-55. doi: 10.1016/j.virol.2013.10.026. Epub 2013 Nov 12.

Abstract

Kaposi's sarcoma-associated herpesvirus LANA (1162 residues) mediates episomal persistence of viral genomes during latency. LANA mediates viral DNA replication and segregates episomes to daughter nuclei. A 59 residue deletion immediately upstream of the internal repeat elements rendered LANA highly deficient for DNA replication and modestly deficient for the ability to segregate episomes, while smaller deletions did not. The 59 amino acid deletion reduced LANA episome persistence by ~14-fold, while sequentially smaller deletions resulted in ~3-fold, or no deficiency. Three distinct LANA regions reorganized heterochromatin, one of which contains the deleted sequence, but the deletion did not abolish LANA's ability to alter chromatin. Therefore, this work identifies a short internal LANA sequence that is critical for DNA replication, has modest effects on episome segregation, and substantially impacts episome persistence; this region may exert its effects through an interacting host cell protein(s).

Keywords: DNA replication; Episome persistence; KSHV; LANA.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Antigens, Viral / chemistry*
  • Antigens, Viral / genetics
  • Antigens, Viral / metabolism*
  • Cell Line
  • Chromatin / metabolism
  • DNA Replication*
  • Herpesviridae Infections / metabolism
  • Herpesviridae Infections / virology*
  • Herpesvirus 8, Human / chemistry
  • Herpesvirus 8, Human / genetics*
  • Herpesvirus 8, Human / physiology
  • Humans
  • Molecular Sequence Data
  • Nuclear Proteins / chemistry*
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism*
  • Plasmids / genetics*
  • Terminal Repeat Sequences*
  • Virus Replication

Substances

  • Antigens, Viral
  • Chromatin
  • Nuclear Proteins
  • latency-associated nuclear antigen