Brain metastasis is predetermined in early stages of cutaneous melanoma by CD44v6 expression through epigenetic regulation of the spliceosome

Pigment Cell Melanoma Res. 2015 Jan;28(1):82-93. doi: 10.1111/pcmr.12307. Epub 2014 Sep 30.

Abstract

Melanoma brain metastasis (MBM) is frequent and has a very poor prognosis with no current predictive factors or therapeutic molecular targets. Our study unravels the molecular alterations of cell-surface glycoprotein CD44 variants during melanoma progression to MBM. High expression of CD44 splicing variant 6 (CD44v6) in primary melanoma (PRM) and regional lymph node metastases from AJCC Stage IIIC patients significantly predicts MBM development. The expression of CD44v6 also enhances the migration of MBM cells by hyaluronic acid and hepatocyte growth factor exposure. Additionally, CD44v6-positive MBM migration is reduced by blocking with a CD44v6-specific monoclonal antibody or knocking down CD44v6 by siRNA. ESRP1 and ESRP2 splicing factors correlate with CD44v6 expression in PRM, and ESRP1 knockdown significantly decreases CD44v6 expression. However, an epigenetic silencing of ESRP1 is observed in metastatic melanoma, specifically in MBM. In advanced melanomas, CD44v6 expression correlates with PTBP1 and U2AF2 splicing factors, and PTBP1 knockdown significantly decreases CD44v6 expression. Overall, these findings open a new avenue for understanding the high affinity of melanoma to progress to MBM, suggesting CD44v6 as a potential MBM-specific factor with theranostic utility for stratifying patients.

Keywords: CD44v6; alternative splicing; brain metastasis; melanoma; spliceosome.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Brain Neoplasms / genetics
  • Brain Neoplasms / secondary*
  • Cell Line, Tumor
  • Cell Movement
  • Disease Progression
  • Epigenesis, Genetic*
  • Gene Expression Regulation, Neoplastic
  • Hepatocyte Growth Factor / metabolism
  • Heterogeneous-Nuclear Ribonucleoproteins / metabolism
  • Humans
  • Hyaluronan Receptors / genetics
  • Hyaluronan Receptors / metabolism*
  • Hyaluronic Acid / metabolism
  • Lymphatic Metastasis / genetics
  • Lymphatic Metastasis / pathology
  • Melanoma / genetics*
  • Melanoma / pathology*
  • Melanoma, Cutaneous Malignant
  • Multivariate Analysis
  • Neoplasm Staging
  • Nuclear Proteins / metabolism
  • Polypyrimidine Tract-Binding Protein / metabolism
  • Proportional Hazards Models
  • Protein Isoforms / genetics
  • Protein Isoforms / metabolism
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • RNA-Binding Proteins / metabolism
  • ROC Curve
  • Ribonucleoproteins / metabolism
  • Skin Neoplasms / enzymology
  • Skin Neoplasms / genetics
  • Skin Neoplasms / pathology
  • Spliceosomes / genetics*
  • Splicing Factor U2AF

Substances

  • CD44v6 antigen
  • ESRP1 protein, human
  • ESRP2 protein, human
  • Heterogeneous-Nuclear Ribonucleoproteins
  • Hyaluronan Receptors
  • Nuclear Proteins
  • PTBP1 protein, human
  • Protein Isoforms
  • RNA, Messenger
  • RNA-Binding Proteins
  • Ribonucleoproteins
  • Splicing Factor U2AF
  • U2AF2 protein, human
  • Polypyrimidine Tract-Binding Protein
  • Hepatocyte Growth Factor
  • Hyaluronic Acid