Flies expand the repertoire of protein structures that bind ice

Proc Natl Acad Sci U S A. 2015 Jan 20;112(3):737-42. doi: 10.1073/pnas.1422272112. Epub 2015 Jan 5.

Abstract

An antifreeze protein (AFP) with no known homologs has been identified in Lake Ontario midges (Chironomidae). The midge AFP is expressed as a family of isoforms at low levels in adults, which emerge from fresh water in spring before the threat of freezing temperatures has passed. The 9.1-kDa major isoform derived from a preproprotein precursor is glycosylated and has a 10-residue tandem repeating sequence xxCxGxYCxG, with regularly spaced cysteines, glycines, and tyrosines comprising one-half its 79 residues. Modeling and molecular dynamics predict a tightly wound left-handed solenoid fold in which the cysteines form a disulfide core to brace each of the eight 10-residue coils. The solenoid is reinforced by intrachain hydrogen bonds, side-chain salt bridges, and a row of seven stacked tyrosines on the hydrophobic side that forms the putative ice-binding site. A disulfide core is also a feature of the similar-sized beetle AFP that is a β-helix with seven 12-residue coils and a comparable circular dichroism spectrum. The midge and beetle AFPs are not homologous and their ice-binding sites are radically different, with the latter comprising two parallel arrays of outward-pointing threonines. However, their structural similarities is an amazing example of convergent evolution in different orders of insects to cope with change to a colder climate and provide confirmation about the physical features needed for a protein to bind ice.

Keywords: antifreeze protein; convergent evolution; disulfide-rich; midge; solenoid.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antifreeze Proteins / chemistry
  • Antifreeze Proteins / metabolism*
  • Diptera / metabolism*
  • Glycosylation
  • Ice*
  • Molecular Sequence Data
  • Protein Conformation
  • Sequence Homology, Amino Acid
  • Tandem Mass Spectrometry

Substances

  • Antifreeze Proteins
  • Ice

Associated data

  • GENBANK/KM102729
  • GENBANK/KM102730