Crystal structure of the human odorant binding protein, OBPIIa

Proteins. 2015 Jun;83(6):1180-4. doi: 10.1002/prot.24797. Epub 2015 Apr 4.

Abstract

Human odorant-binding protein, OBPIIa , is expressed by nasal epithelia to facilitate transport of hydrophobic odorant molecules across the aqueous mucus. Here, we report its crystallographic analysis at 2.6 Å resolution. OBPIIa is a monomeric protein that exhibits the classical lipocalin fold with a conserved eight-stranded β-barrel harboring a remarkably large hydrophobic pocket. Basic residues within the four loops that shape the entrance to this ligand-binding site evoke a positive electrostatic potential. Human OBPIIa shows distinct features compared with other mammalian OBPs, including a potentially reactive Cys side chain within its pocket similar to human tear lipocalin.

Keywords: ligand binding; lipocalin; mammalian odorant binding protein; nasal epithelia; protein crystallization.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Binding Sites
  • Crystallography, X-Ray
  • Humans
  • Lipocalins / chemistry*
  • Lipocalins / metabolism*
  • Models, Molecular
  • Molecular Sequence Data
  • Protein Binding
  • Protein Folding
  • Sequence Alignment

Substances

  • Lipocalins
  • OBP2A protein, human

Associated data

  • PDB/4RUN