Proteins binding to the liver-specific pyruvate kinase gene promoter. A unique combination of known factors

J Mol Biol. 1989 Sep 20;209(2):205-19. doi: 10.1016/0022-2836(89)90273-8.

Abstract

A 183 base-pair fragment of the liver-specific promoter of the L-type puruvate kinase (L-PK) gene has been shown by transfection assay to be sufficient to confer a tissue-specific expression to a reporter gene. The proteins binding in vitro to this fragment have been investigated by a combination of DNase I footprinting, gel retardation of synthetic oligonucleotides and ultraviolet cross-linking. Four proteins from liver nuclear extracts bind to the investigated fragment. They were called, from 3' to 5', L1 to L4 binding factors. The L1 site (nucleotides -95 to -66 with respect to the cap site) binds hepatocyte nuclear factor 1 (HNF1), a liver-specific protein. The L2 site (nucleotides -114 to -97) binds the ubiquitous nuclear factor 1 (NF1), or a related factor. The L3 site (nucleotides -144 to -126) binds liver factor A1 (LF-A1), another liver-specific protein. Finally, the L4 site (nucleotides -168 to -145) binds major late transcription factor (MLTF/USF/UEF), an ubiquitous protein. Each of these proteins has been detected in other liver-specific promoters, but their combination is unique to the liver-specific promoter of the L-PK gene.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • Binding Sites
  • CCAAT-Enhancer-Binding Proteins*
  • DNA-Binding Proteins / metabolism
  • Deoxyribonucleases / analysis
  • Deoxyribonucleases / metabolism
  • Genes
  • Liver / enzymology*
  • Male
  • Molecular Sequence Data
  • NFI Transcription Factors
  • Nuclear Proteins
  • Nucleoproteins / metabolism*
  • Promoter Regions, Genetic*
  • Pyruvate Kinase / genetics*
  • Pyruvate Kinase / metabolism
  • Rats
  • Rats, Inbred Strains
  • Restriction Mapping
  • Transcription Factors / metabolism
  • Viral Proteins
  • Y-Box-Binding Protein 1

Substances

  • CCAAT-Enhancer-Binding Proteins
  • DNA-Binding Proteins
  • MLTF protein, adenovirus
  • NFI Transcription Factors
  • Nuclear Proteins
  • Nucleoproteins
  • Transcription Factors
  • Viral Proteins
  • Y-Box-Binding Protein 1
  • YBX1 protein, human
  • Pyruvate Kinase
  • Deoxyribonucleases