High concentrations of chromophoric dissolved organic matter (CDOM) are terrestrially derived from upstream tributaries to Lake Taihu, China, and are influenced by hydrological conditions of the upstream watershed. To investigate how the dynamics of CDOM in Lake Taihu are influenced by upstream inflow runoff, four sampling cruises, differing in hydrological conditions, were undertaken in the lake and its three major tributaries, rivers Yincun, Dapu, and Changdou. CDOM absorption, fluorescence spectroscopy, chemical oxygen demand (COD), and stable isotope δ(13)C and δ(15)N measurements were conducted to characterize the dynamics of CDOM. The mean absorption coefficient a(350) collected from the three river profiles (5.15 ± 1.92 m(-1)) was significantly higher than that of the lake (2.95 ± 1.88 m(-1)), indicating that the upstream rivers carried a substantial load of CDOM to the lake. This finding was substantiated by the exclusively terrestrial signal exhibited by the level of δ(13)C (-26.23 ± 0.49‰) of CDOM samples collected from the rivers. Mean a(350) and COD in Lake Taihu were significantly higher in the wet season than in the dry season (t test, p < 0.0001), suggesting that the abundance of CDOM in the lake is strongly influenced by hydrological conditions of the watershed. Four components were identified by parallel factor analysis, including two protein-like components (C1 and C2), a terrestrial humic-like component (C3), and a microbial humic-like (C4) component. The contribution percentage of the two humic-like components relative to the summed fluorescence intensity of the four components (C humic) increased significantly from the dry to the wet season. This seasonal difference in contribution further substantiated that an enhanced rainfall followed by an elevated inflow runoff in the lake watershed in the wet season may result in an increase in humic-like substances being discharged into the lake compared to that in the dry season. This finding was further supported by an elevated a(250)/a(365) of CDOM samples collected in the lake in the wet season than in the dry season. Significantly higher mean levels of C3 and a(350) were recorded for CDOM samples collected from River Yincun than those from rivers Dapu and Changdou, differing in seasons, suggesting the significance of terrestrial CDOM input from River Yincun.