Comparative Functional Analysis of 12 Mammalian IFN-λ4 Orthologs

J Interferon Cytokine Res. 2016 Jan;36(1):30-6. doi: 10.1089/jir.2015.0096. Epub 2015 Aug 26.

Abstract

IFN-λ4 is a novel type-III interferon with strong clinical significance in humans. Only a subset of individuals--up to 10% of Asians, 50% of Europeans, and 90% of Africans--carry the ΔG allele of a genetic variant rs368234815-TT/ΔG and are genetically able to produce IFN-λ4 protein. Carriers of the ΔG allele have impaired ability to clear infection with hepatitis C virus (HCV). IFN-λ4 is also predicted to exist and be functionally important in several nonhuman mammals. In this study, we present the first comparative analysis of 12 mammalian IFN-λ4 orthologs in a human hepatic cell line, HepG2, which supports signaling of the human IFN-λ4. We show that despite differences in protein sequences, functional properties of the recombinant human and nonhuman IFN-λ4 proteins are comparable-they are all expressed as predominantly cytoplasmic proteins that are biologically active for induction of interferon signaling. We show that several IFN-λ4 orthologs can be detected by Western blotting, flow cytometry, and confocal imaging using a monoclonal antibody developed for the human IFN-λ4. Studies of IFN-λ4 in animals should help improve our understanding of the biology of this novel clinically important interferon in normal and disease conditions.

Publication types

  • Comparative Study
  • Research Support, N.I.H., Intramural

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Cytosol / immunology
  • Cytosol / metabolism
  • Gene Expression
  • Genes, Reporter
  • Hep G2 Cells
  • Humans
  • Interleukins / genetics*
  • Interleukins / immunology
  • Luciferases / genetics
  • Luciferases / immunology
  • Molecular Sequence Data
  • Plasmids / chemistry
  • Plasmids / metabolism
  • Recombinant Proteins / genetics
  • Recombinant Proteins / immunology
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Species Specificity
  • Transfection

Substances

  • IFNL4 protein, human
  • Interleukins
  • Recombinant Proteins
  • Luciferases