Catalytic role of histidine 147 in Escherichia coli thymidylate synthase

J Biol Chem. 1989 Nov 15;264(32):19132-7.

Abstract

Nine mutant thymidylate synthases were isolated that only differed in sequence at position 147. The wild-type enzyme (which had a histidine residue at 147) and mutant enzymes were purified to near homogeneity and their kinetic properties were compared. Although the kcat values for the mutant enzymes were 10-10,000-fold lower than for the wild-type enzyme, the Km values for both 2'-deoxyuridylate and 5,10-methylenetetrahydrofolate were nearly identical for all the enzymes indicating that His-147 is not significantly involved in initial substrate binding. By comparing the wild-type (His-147) to the glycine (Gly-147) enzyme, the side chain of His-147 was estimated to lower the activation energy of the catalytic step by 1.6-2.9 kcal mol-1. In contrast to the wild-type enzyme, the activity of the Gly-147 enzyme decreased when the pH was raised above 7.5. The activity loss coincided with the deprotonation of a residue that had a pKa of 9.46 +/- 0.2 and an enthalpy of ionization (delta Hion) of 12.1 +/- 0.9. These values are consistent with the involvement of a lysine or an arginine residue in the catalytic process. An inspection of the rates of ternary complex formation among enzyme, 5-fluoro-2'-deoxyuridylate, and 5,10-methylenetetrahydrofolate for the mutant enzymes indicated that His-147 is not needed for the proton removal from C-5 of 2'-deoxyuridylate but rather participates in an initial catalytic step and alters the pKa value of a catalytically important lysine or arginine residue.

MeSH terms

  • Amino Acid Sequence
  • Codon / genetics
  • Escherichia coli / enzymology*
  • Escherichia coli / genetics
  • Histidine*
  • Hydrogen-Ion Concentration
  • Kinetics
  • Molecular Sequence Data
  • Mutation
  • Peptide Fragments / isolation & purification
  • Thermodynamics
  • Thymidylate Synthase / genetics
  • Thymidylate Synthase / metabolism*
  • Trypsin

Substances

  • Codon
  • Peptide Fragments
  • Histidine
  • Thymidylate Synthase
  • Trypsin