DNA methylation changes at SNCA intron 1 in patients with dementia with Lewy bodies

Psychiatry Clin Neurosci. 2017 Jan;71(1):28-35. doi: 10.1111/pcn.12462. Epub 2016 Nov 3.

Abstract

Aim: It is difficult to diagnose dementia with Lewy bodies (DLB) because it exhibits clinical and neuropathological overlap with both Alzheimer's disease and Parkinson's disease. The α-synuclein protein is a major component of Lewy bodies, and accumulation of α-synuclein aggregates causes synaptic dysfunction in DLB. Epigenetic changes at the synuclein alpha ( SNCA ) gene may be involved in DLB pathogenesis.

Methods: We examined DNA methylation rates at 10 CpG sites located in intron 1 of SNCA and SNCA mRNA expression in peripheral leukocytes to compare DLB patients (n = 20; nine men, 11 women; age = 78.8 ± 7.7 years) with healthy controls (n = 20; eight men, 12 women; age = 77.0 ± 6.9 years).

Results: The methylation rate at CpG 4 ( P = 0.002) and the overall mean methylation rate at these sites (P < 0.001) were significantly lower in DLB patients than in healthy controls after Bonferroni correction. Although SNCA126 , a partial form of SNCA mRNA expression, was significantly increased in DLB ( P = 0.017), there was no significant difference in total SNCA mRNA expression between DLB patients and healthy controls ( P = 0.165). No correlation was observed between SCNA mRNA expression levels and blood DNA methylation rates in either DLB or healthy controls.

Conclusion: Our findings indicated that lower methylation rates may be a biomarker for DLB.

Keywords: SNCA gene; dementia with Lewy bodies; gene expression; methylation; pyrosequencer.

MeSH terms

  • Aged
  • Aged, 80 and over
  • Biomarkers / metabolism
  • CpG Islands
  • DNA Methylation / physiology*
  • Female
  • Humans
  • Introns
  • Lewy Body Disease / blood
  • Lewy Body Disease / metabolism*
  • Male
  • RNA, Messenger / metabolism
  • alpha-Synuclein / metabolism*

Substances

  • Biomarkers
  • RNA, Messenger
  • SNCA protein, human
  • alpha-Synuclein