Prediction of chronic damage in systemic lupus erythematosus by using machine-learning models

PLoS One. 2017 Mar 22;12(3):e0174200. doi: 10.1371/journal.pone.0174200. eCollection 2017.

Abstract

Objective: The increased survival in Systemic Lupus Erythematosus (SLE) patients implies the development of chronic damage, occurring in up to 50% of cases. Its prevention is a major goal in the SLE management. We aimed at predicting chronic damage in a large monocentric SLE cohort by using neural networks.

Methods: We enrolled 413 SLE patients (M/F 30/383; mean age ± SD 46.3±11.9 years; mean disease duration ± SD 174.6 ± 112.1 months). Chronic damage was assessed by the SLICC/ACR Damage Index (SDI). We applied Recurrent Neural Networks (RNNs) as a machine-learning model to predict the risk of chronic damage. The clinical data sequences registered for each patient during the follow-up were used for building and testing the RNNs.

Results: At the first visit in the Lupus Clinic, 35.8% of patients had an SDI≥1. For the RNN model, two groups of patients were analyzed: patients with SDI = 0 at the baseline, developing damage during the follow-up (N = 38), and patients without damage (SDI = 0). We created a mathematical model with an AUC value of 0.77, able to predict damage development. A threshold value of 0.35 (sensitivity 0.74, specificity 0.76) seemed able to identify patients at risk to develop damage.

Conclusion: We applied RNNs to identify a prediction model for SLE chronic damage. The use of the longitudinal data from the Sapienza Lupus Cohort, including laboratory and clinical items, resulted able to construct a mathematical model, potentially identifying patients at risk to develop damage.

MeSH terms

  • Adult
  • Disease Progression
  • Female
  • Humans
  • Longitudinal Studies
  • Lupus Erythematosus, Systemic / pathology*
  • Machine Learning
  • Male
  • Sensitivity and Specificity
  • Severity of Illness Index

Grants and funding

The authors received no specific funding for this work.