Mechanism of pathogen recognition by human dectin-2

J Biol Chem. 2017 Aug 11;292(32):13402-13414. doi: 10.1074/jbc.M117.799080. Epub 2017 Jun 26.

Abstract

Dectin-2, a C-type lectin on macrophages and other cells of the innate immune system, functions in response to pathogens, particularly fungi. The carbohydrate-recognition domain (CRD) in dectin-2 is linked to a transmembrane sequence that interacts with the common Fc receptor γ subunit to initiate immune signaling. The molecular mechanism by which dectin-2 selectively binds to pathogens has been investigated by characterizing the CRD expressed in a bacterial system. Competition binding studies indicated that the CRD binds to monosaccharides with modest affinity and that affinity was greatly enhanced for mannose-linked α1-2 or α1-4 to a second mannose residue. Glycan array analysis confirmed selective binding of the CRD to glycans that contain Manα1-2Man epitopes. Crystals of the CRD in complex with a mammalian-type high-mannose Man9GlcNAc2 oligosaccharide exhibited interaction with Manα1-2Man on two different termini of the glycan, with the reducing-end mannose residue ligated to Ca2+ in a primary binding site and the nonreducing terminal mannose residue occupying an adjacent secondary site. Comparison of the binding sites in DC-SIGN and langerin, two other pathogen-binding receptors of the innate immune system, revealed why these two binding sites accommodate only terminal Manα1-2Man structures, whereas dectin-2 can bind Manα1-2Man in internal positions in mannans and other polysaccharides. The specificity and geometry of the dectin-2-binding site provide the molecular mechanism for binding of dectin-2 to fungal mannans and also to bacterial lipopolysaccharides, capsular polysaccharides, and lipoarabinomannans that contain the Manα1-2Man disaccharide unit.

Keywords: CLEC6A; carbohydrate-binding protein; glycobiology; lectin; macrophage; protein structure.

Publication types

  • Comparative Study

MeSH terms

  • Binding Sites
  • Carbohydrate Conformation
  • Crystallography, X-Ray
  • Disaccharides / chemistry
  • Disaccharides / metabolism*
  • Epitopes / chemistry
  • Epitopes / metabolism
  • Escherichia coli / immunology
  • Escherichia coli / metabolism
  • Humans
  • Immobilized Proteins / chemistry
  • Immobilized Proteins / genetics
  • Immobilized Proteins / metabolism
  • Immunity, Innate*
  • Inclusion Bodies / metabolism
  • Kinetics
  • Lectins, C-Type / chemistry
  • Lectins, C-Type / genetics
  • Lectins, C-Type / metabolism*
  • Ligands
  • Mannose / chemistry
  • Mannose / metabolism*
  • Models, Molecular*
  • Oligosaccharides / chemistry
  • Oligosaccharides / metabolism*
  • Peptide Fragments / chemistry
  • Peptide Fragments / genetics
  • Peptide Fragments / metabolism
  • Phylogeny
  • Polysaccharides / chemistry
  • Polysaccharides / metabolism*
  • Protein Conformation
  • Protein Interaction Domains and Motifs
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / metabolism

Substances

  • CLEC6A protein, human
  • Disaccharides
  • Epitopes
  • Immobilized Proteins
  • Lectins, C-Type
  • Ligands
  • Oligosaccharides
  • Peptide Fragments
  • Polysaccharides
  • Recombinant Proteins
  • Mannose

Associated data

  • PDB/4ZET
  • PDB/3VYK
  • PDB/4ZRV
  • PDB/2IT6
  • PDB/3P5F
  • PDB/5VYB