Novel intragenic deletions within the UBE3A gene in two unrelated patients with Angelman syndrome: case report and review of the literature

BMC Med Genet. 2017 Nov 21;18(1):137. doi: 10.1186/s12881-017-0500-x.

Abstract

Background: Patients with Angelman syndrome (AS) are affected by severe intellectual disability with absence of speech, distinctive dysmorphic craniofacial features, ataxia and a characteristic behavioral phenotype. AS is caused by the lack of expression in neurons of the UBE3A gene, which is located in the 15q11.2-q13 imprinted region. Functional loss of UBE3A is due to 15q11.2-q13 deletion, mutations in the UBE3A gene, paternal uniparental disomy and genomic imprinting defects.

Case presentation: We report here two patients with clinical features of AS referred to our hospital for clinical follow-up and genetic diagnosis. Methylation Specific-Multiplex Ligation-Dependent Probe Amplification (MS-MLPA) of the 15q11.2-q13 region was carried out in our laboratory as the first diagnostic tool detecting two novel UBE3A intragenic deletions. Subsequently, the MLPA P336-A2 kit was used to confirm and determine the size of the UBE3A deletion in the two patients. A review of the clinical features of previously reported patients with whole UBE3A gene or partial intragenic deletions is presented here together with these two new patients.

Conclusion: Although rare, UBE3A intragenic deletions may represent a small fraction of AS patients without a genetic diagnosis. Testing for UBE3A intragenic exonic deletions should be performed in those AS patients with a normal methylation pattern and no mutations in the UBE3A gene.

Keywords: Angelman syndrome (AS); Intragenic deletions; MLPA; UBE3A.

Publication types

  • Case Reports
  • Review
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Angelman Syndrome / diagnosis
  • Angelman Syndrome / genetics*
  • Angelman Syndrome / pathology
  • Base Sequence*
  • Child, Preschool
  • Chromosomes, Human, Pair 15*
  • Exons
  • Female
  • Gene Dosage
  • Genomic Imprinting*
  • Humans
  • Neurons / metabolism
  • Neurons / pathology
  • Nucleic Acid Amplification Techniques
  • Reagent Kits, Diagnostic
  • Sequence Deletion*
  • Ubiquitin-Protein Ligases / deficiency
  • Ubiquitin-Protein Ligases / genetics*

Substances

  • Reagent Kits, Diagnostic
  • UBE3A protein, human
  • Ubiquitin-Protein Ligases