Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser

Science. 2018 Jul 13;361(6398):eaat0094. doi: 10.1126/science.aat0094. Epub 2018 Jun 14.

Abstract

Ultrafast isomerization of retinal is the primary step in photoresponsive biological functions including vision in humans and ion transport across bacterial membranes. We used an x-ray laser to study the subpicosecond structural dynamics of retinal isomerization in the light-driven proton pump bacteriorhodopsin. A series of structural snapshots with near-atomic spatial resolution and temporal resolution in the femtosecond regime show how the excited all-trans retinal samples conformational states within the protein binding pocket before passing through a twisted geometry and emerging in the 13-cis conformation. Our findings suggest ultrafast collective motions of aspartic acid residues and functional water molecules in the proximity of the retinal Schiff base as a key facet of this stereoselective and efficient photochemical reaction.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Aspartic Acid / chemistry
  • Bacteriorhodopsins / chemistry*
  • Bacteriorhodopsins / radiation effects*
  • Ion Transport
  • Isomerism
  • Protein Conformation
  • Retinaldehyde / chemistry*
  • Retinaldehyde / radiation effects*
  • Schiff Bases / chemistry
  • Time Factors
  • Water / chemistry
  • X-Rays

Substances

  • Schiff Bases
  • Water
  • Aspartic Acid
  • Bacteriorhodopsins
  • Retinaldehyde