Nuclear localized Raf1 isoform alters DNA-dependent protein kinase activity and the DNA damage response

FASEB J. 2019 Jan;33(1):1138-1150. doi: 10.1096/fj.201800336R. Epub 2018 Aug 14.

Abstract

Raf1/c-Raf is a well-characterized serine/threonine-protein kinase that links Ras family members with the MAPK/ERK signaling cascade. We have identified a novel splice isoform of human Raf1 that causes protein truncation and loss of the C-terminal kinase domain (Raf1-tr). We found that Raf1-tr has increased nuclear localization compared with full-length Raf1, and this finding was secondary to reduced binding of Raf1-tr to the cytoplasmic chaperone FK506 binding protein 5. We show that Raf1-tr has increased binding to DNA-dependent protein kinase (DNA-PK), which inhibits DNA-PK function and causes amplification of irradiation- and bleomycin-induced DNA damage. We found that the human colorectal cancer cell line, HCT-116, displayed reduced expression of Raf1-tr, and reintroduction of Raf1-tr sensitized the cells to bleomycin-induced apoptosis. Furthermore, we identified differential Raf1-tr expression in breast cancer cell lines and showed that breast cancer cells with increased Raf1-tr expression become sensitized to bleomycin-induced apoptosis. Collectively, these results demonstrate a novel Raf1 isoform in humans that has a unique noncanonical role in regulating the double-stranded DNA damage response pathway through modulation of DNA-PK function.-Nixon, B. R., Sebag, S. C., Glennon, M. S., Hall, E. J., Kounlavong, E. S., Freeman, M. L., Becker, J. R. Nuclear localized Raf1 isoform alters DNA-dependent protein kinase activity and the DNA damage response.

Keywords: cancer biology; nuclear translocation; signal transduction.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing
  • Antibiotics, Antineoplastic / pharmacology
  • Apoptosis / drug effects
  • Bleomycin / pharmacology
  • Cell Line, Tumor
  • Cell Nucleus / metabolism*
  • DNA / drug effects
  • DNA / radiation effects
  • DNA Damage*
  • DNA-Activated Protein Kinase / metabolism*
  • Extracellular Signal-Regulated MAP Kinases / metabolism
  • HEK293 Cells
  • Humans
  • Protein Binding
  • Protein Isoforms / metabolism*
  • Proto-Oncogene Proteins c-raf / metabolism*
  • Signal Transduction
  • Tacrolimus Binding Proteins / metabolism
  • ras Proteins / metabolism

Substances

  • Antibiotics, Antineoplastic
  • Protein Isoforms
  • Bleomycin
  • DNA
  • DNA-Activated Protein Kinase
  • Proto-Oncogene Proteins c-raf
  • Raf1 protein, human
  • Extracellular Signal-Regulated MAP Kinases
  • ras Proteins
  • Tacrolimus Binding Proteins
  • tacrolimus binding protein 5