Clinical relevance of enteropathogen co-infections in preschool children-a population-based repeated cross-sectional study

Clin Microbiol Infect. 2019 Aug;25(8):1039.e7-1039.e13. doi: 10.1016/j.cmi.2018.11.029. Epub 2018 Dec 13.

Abstract

Objectives: This study aimed to (i) determine risk factors for enteropathogen co-infections, (ii) determine whether enteropathogen co-infections influence gastroenteritis risk, and (iii) determine whether enteropathogen co-infection occurred randomly in preschool children.

Methods: A monthly-repeated cross-sectional survey in Dutch children aged 0-48 months was conducted during October 2012 to October 2014. A total of 981 stool samples were collected along with questionnaires collecting data on gastrointestinal symptoms and potential risk factors; 822 samples were successfully tested for 19 enteropathogens using real-time multiplex PCRs. Logistic regression analysis assessed co-infections in relation to gastroenteritis and potential risk factors.

Results: In all, 598/822 (72.7%) stool samples tested positive for at least one enteropathogen, of which 290 (48.5%) were positive for two or more enteropathogens. Risk factors for two or more enteropathogen co-infections were young age (<12 months, OR 1.9, 95% CI 1.1-3.3; 13-36 months, OR 1.7, 95% CI 1.1-2.5, versus 37-48 months), day-care attendance (OR 1.8, 95% CI 1.3-2.5), households with three or more children versus those with one child (OR 1.7, 95% CI 1.1-2.8). Stool samples collected in spring less often had two or more enteropathogens versus summer (OR 0.4, 95% CI 0.2-0.7). Food allergy was a risk factor for three or more enteropathogen co-infections (OR 3.2, 95% CI 1.1-8.9). The frequency of co-infection was higher than expected for norovirus GI/norovirus GII, Clostridium difficile/norovirus GI, C. difficile/rotavirus, astrovirus/Dientamoeba fragilis, atypical enteropathogenic Escherichia coli/adenovirus, typical enteropathogenic E. coli/adenovirus, and enteroaggregative E. coli/astrovirus. No co-infection was associated with increased gastroenteritis risk.

Conclusions: Risk factors for enteropathogen co-infections were identified and specific enteropathogens co-occurred significantly more often than expected by chance. Enteropathogen co-infections were not associated with increased gastroenteritis risk, calling into question their clinical relevance in preschool children.

Keywords: Childhood infection; Co-infection; Epidemiology; Gastroenteritis; Risk factors.

MeSH terms

  • Child, Preschool
  • Coinfection / epidemiology*
  • Cross-Sectional Studies
  • Dientamoebiasis / epidemiology
  • Enteropathogenic Escherichia coli
  • Escherichia coli Infections / epidemiology
  • Family Characteristics
  • Feces / microbiology
  • Feces / parasitology
  • Feces / virology
  • Female
  • Gastroenteritis / epidemiology*
  • Gastroenteritis / microbiology
  • Gastroenteritis / parasitology
  • Gastroenteritis / virology
  • Humans
  • Infant
  • Infant, Newborn
  • Male
  • Netherlands / epidemiology
  • Risk Factors
  • Rotavirus Infections / epidemiology