Development and characterization of 17 polymorphic microsatellite markers for the reef manta ray (Mobula alfredi)

BMC Res Notes. 2019 Apr 22;12(1):233. doi: 10.1186/s13104-019-4270-8.

Abstract

Objective: Limited sample sizes are often a problem for species of conservation concern when using genetic tools to make population assessments. Lack of analytical power from small sample sizes can be compensated for by use of a large marker set. Here we report on development and characterization of 17 novel microsatellite markers for the reef manta ray (Mobula alfredi).

Results: Loci were screened on 60 reef manta rays (M. alfredi) sampled from the east coast of Australia. The number of alleles per locus varied from 2 to 13 with observed heterozygosities ranging between 0.300 and 0.917. The development of these 17 additional markers increases the total number of microsatellite markers available for this species to 27.

Keywords: Conservation genetics; Microsatellite loci; Population genetics; Short tandem repeats.

MeSH terms

  • Alleles
  • Animals
  • Australia
  • Conservation of Natural Resources
  • Endangered Species
  • Genetic Loci*
  • Genetic Markers
  • Genetics, Population
  • Genome*
  • Heterozygote
  • Microsatellite Repeats*
  • Skates, Fish / genetics*

Substances

  • Genetic Markers