Role of miR-214 in regulation of β-catenin and the malignant phenotype of melanoma

Mol Carcinog. 2019 Nov;58(11):1974-1984. doi: 10.1002/mc.23089. Epub 2019 Jul 24.

Abstract

Wnt/β-catenin signaling plays an important role in melanocyte biology, especially in the early stages of melanocyte transformation and melanomagenesis. β-catenin, encoded by the gene CTNNB1, is an intracellular signal transducer of Wnt signaling and activates transcription of genes important for cell proliferation and survival. Wnt/β-catenin signaling is frequently activated in melanoma through oncogenic mutations of β-catenin and elevated β-catenin levels are positively correlated with melanoma aggressiveness. Molecular mechanisms that regulate β-catenin expression in melanoma are not fully understood. MicroRNA-214 is known to function as a tumor suppressor by targeting β-catenin in several types of cancer cells. Here, we investigated the regulation of β-catenin by miR-214 and its role in melanoma. We show that β-catenin mRNA levels are negatively correlated with miR-214 in melanoma. However, overexpression of miR-214 paradoxically increased β-catenin protein levels and promoted malignant properties of melanoma cells including resistance to mitogen-activated protein kinase inhibitors (MAPKi). RNA-seq analysis revealed that melanoma cells predominantly express a β-catenin mRNA isoform lacking miR-214 target site. Using matched miRNA and mRNA-seq and bioinformatics analysis, we identified novel miR-214 targets, ankyrin repeat domain 6 (ANKRD6) and C-terminal binding protein 1 (CTBP1), that are involved in negative regulation of Wnt signaling. Overexpression of miR-214 or knockdown of the novel miR-214 targets, ANKRD6 or CTBP1, increased melanoma cell proliferation, migration, and decreased sensitivity to MAPKi. Our data suggest that in melanoma cells β-catenin is not regulated by miR-214 and the functions of miR-214 in melanoma are mediated partly by regulating proteins involved in attenuation of Wnt/β-catenin signaling.

Keywords: CTNNB1; Wnt/β-catenin signaling pathway; chemoresistance; metastatic melanoma; microRNA-214; tumor growth.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Alcohol Oxidoreductases / genetics
  • Cell Line, Tumor
  • Cell Movement / genetics
  • Cell Proliferation / genetics
  • Cytoskeletal Proteins / genetics
  • DNA-Binding Proteins / genetics
  • Gene Expression Regulation, Neoplastic / genetics
  • Humans
  • Melanoma / genetics*
  • Melanoma / pathology
  • MicroRNAs / genetics*
  • RNA, Messenger / genetics
  • Wnt Signaling Pathway / genetics
  • beta Catenin / genetics*

Substances

  • ANKRD6 protein, human
  • CTNNB1 protein, human
  • Cytoskeletal Proteins
  • DNA-Binding Proteins
  • MIRN214 microRNA, human
  • MicroRNAs
  • RNA, Messenger
  • beta Catenin
  • Alcohol Oxidoreductases
  • C-terminal binding protein