Thermodynamic profiles of the interactions of suramin, chondroitin sulfate, and pentosan polysulfate with the inhibitory domain of TIMP-3

FEBS Lett. 2020 Jan;594(1):94-103. doi: 10.1002/1873-3468.13556. Epub 2019 Sep 13.

Abstract

Extracellular levels of soluble TIMP-3 are low, reflecting its binding by extracellular matrix (ECM) components including sulfated glycosaminoglycans (SGAGs) and endocytosis via low density lipoprotein receptor-related protein 1. Since TIMP-3 inhibits ECM degradation, the ability of SGAGs to elevate extracellular TIMP-3 is significant for osteoarthritis treatment. Previous studies of such interactions have utilized immobilized TIMP-3 or ligands. Here, we report the thermodynamics of the interactions of the sGAG-binding N-domain of TIMP-3 with chondroitin sulfate, pentosan polysulfate, and suramin in solution using isothermal titration calorimetry. All three interactions are driven by a favorable negative enthalpy change combined with an unfavorable decrease in entropy. The heat capacity changes (ΔCp ) for all of the interactions are zero, indicating an insignificant contribution from hydrophobic interactions.

Keywords: TIMP-3; chondroitin sulfate; glycosaminoglycans; isothermal titration calorimetry; pentosan polysulfate; suramin.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Binding Sites
  • Chondroitin Sulfates / chemistry
  • Chondroitin Sulfates / pharmacology*
  • Humans
  • Molecular Docking Simulation*
  • Pentosan Sulfuric Polyester / chemistry
  • Pentosan Sulfuric Polyester / pharmacology*
  • Protein Binding
  • Suramin / chemistry
  • Suramin / pharmacology*
  • Tissue Inhibitor of Metalloproteinase-3 / chemistry*
  • Tissue Inhibitor of Metalloproteinase-3 / metabolism

Substances

  • TIMP3 protein, human
  • Tissue Inhibitor of Metalloproteinase-3
  • Pentosan Sulfuric Polyester
  • Suramin
  • Chondroitin Sulfates