A Deep Learning Segmentation Approach in Free-Breathing Real-Time Cardiac Magnetic Resonance Imaging

Biomed Res Int. 2019 Jul 30:2019:5636423. doi: 10.1155/2019/5636423. eCollection 2019.

Abstract

Objectives: The purpose of this study was to segment the left ventricle (LV) blood pool, LV myocardium, and right ventricle (RV) blood pool of end-diastole and end-systole frames in free-breathing cardiac magnetic resonance (CMR) imaging. Automatic and accurate segmentation of cardiac structures could reduce the postprocessing time of cardiac function analysis.

Method: We proposed a novel deep learning network using a residual block for the segmentation of the heart and a random data augmentation strategy to reduce the training time and the problem of overfitting. Automated cardiac diagnosis challenge (ACDC) data were used for training, and the free-breathing CMR data were used for validation and testing.

Results: The average Dice was 0.919 (LV), 0.806 (myocardium), and 0.818 (RV). The average IoU was 0.860 (LV), 0.699 (myocardium), and 0.761 (RV).

Conclusions: The proposed method may aid in the segmentation of cardiac images and improves the postprocessing efficiency of cardiac function analysis.

MeSH terms

  • Adult
  • Algorithms
  • Deep Learning
  • Female
  • Heart / diagnostic imaging*
  • Heart / physiology
  • Heart Ventricles / diagnostic imaging*
  • Humans
  • Image Interpretation, Computer-Assisted
  • Magnetic Resonance Imaging
  • Male
  • Neural Networks, Computer
  • Respiration*
  • Ventricular Function / physiology*