A rare CACNA1H variant associated with amyotrophic lateral sclerosis causes complete loss of Cav3.2 T-type channel activity

Mol Brain. 2020 Mar 6;13(1):33. doi: 10.1186/s13041-020-00577-6.

Abstract

Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disorder characterized by the progressive loss of cortical, brain stem and spinal motor neurons that leads to muscle weakness and death. A previous study implicated CACNA1H encoding for Cav3.2 calcium channels as a susceptibility gene in ALS. In the present study, two heterozygous CACNA1H variants were identified by whole genome sequencing in a small cohort of ALS patients. These variants were functionally characterized using patch clamp electrophysiology, biochemistry assays, and molecular modeling. A previously unreported c.454GTAC > G variant produced an inframe deletion of a highly conserved isoleucine residue in Cav3.2 (p.ΔI153) and caused a complete loss-of-function of the channel, with an additional dominant-negative effect on the wild-type channel when expressed in trans. In contrast, the c.3629C > T variant caused a missense substitution of a proline with a leucine (p.P1210L) and produced a comparatively mild alteration of Cav3.2 channel activity. The newly identified ΔI153 variant is the first to be reported to cause a complete loss of Cav3.2 channel function. These findings add to the notion that loss-of-function of Cav3.2 channels associated with rare CACNA1H variants may be risk factors in the complex etiology of ALS.

Keywords: ALS; Amyotrophic lateral sclerosis; Biophysics; CACNA1H; Calcium channel; Cav3.2 channel; Motor neuron disease; Mutation; T-type channel.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Amyotrophic Lateral Sclerosis* / genetics
  • Animals
  • Calcium Channels, T-Type* / chemistry
  • Calcium Channels, T-Type* / genetics
  • Genes, Dominant
  • Genetic Association Studies*
  • Genetic Predisposition to Disease*
  • Heterozygote
  • Humans
  • Male
  • Mutation* / genetics
  • Rats
  • Structural Homology, Protein
  • Whole Genome Sequencing

Substances

  • CACNA1H protein, human
  • Calcium Channels, T-Type