Initiation of Parental Genome Reprogramming in Fertilized Oocyte by Splicing Kinase SRPK1-Catalyzed Protamine Phosphorylation

Cell. 2020 Mar 19;180(6):1212-1227.e14. doi: 10.1016/j.cell.2020.02.020. Epub 2020 Mar 12.

Abstract

The paternal genome undergoes a massive exchange of histone with protamine for compaction into sperm during spermiogenesis. Upon fertilization, this process is potently reversed, which is essential for parental genome reprogramming and subsequent activation; however, it remains poorly understood how this fundamental process is initiated and regulated. Here, we report that the previously characterized splicing kinase SRPK1 initiates this life-beginning event by catalyzing site-specific phosphorylation of protamine, thereby triggering protamine-to-histone exchange in the fertilized oocyte. Interestingly, protamine undergoes a DNA-dependent phase transition to gel-like condensates and SRPK1-mediated phosphorylation likely helps open up such structures to enhance protamine dismissal by nucleoplasmin (NPM2) and enable the recruitment of HIRA for H3.3 deposition. Remarkably, genome-wide assay for transposase-accessible chromatin sequencing (ATAC-seq) analysis reveals that selective chromatin accessibility in both sperm and MII oocytes is largely erased in early pronuclei in a protamine phosphorylation-dependent manner, suggesting that SRPK1-catalyzed phosphorylation initiates a highly synchronized reorganization program in both parental genomes.

Keywords: SR protein-specific kinase; fertilization; genome reprogramming; histone chaperones; phosphorylation; protamine; protamine-to-histone exchange; zygotic development.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Cell Cycle Proteins / metabolism
  • Cell Nucleus / metabolism
  • Chromatin / metabolism*
  • Chromatin / physiology
  • Chromatin Assembly and Disassembly / genetics
  • Chromatin Assembly and Disassembly / physiology
  • Fertilization / genetics
  • Histones / metabolism
  • Male
  • Mice
  • Mice, Inbred BALB C
  • Mice, Inbred C57BL
  • Mice, Knockout
  • Oocytes / metabolism
  • Oocytes / physiology
  • Phosphorylation
  • Protamine Kinase / genetics
  • Protamine Kinase / metabolism
  • Protamines / genetics
  • Protamines / metabolism*
  • Protein Serine-Threonine Kinases / metabolism*
  • Protein Serine-Threonine Kinases / physiology
  • RNA Splicing / genetics
  • RNA Splicing / physiology
  • Spermatozoa / metabolism
  • Transcription Factors / metabolism
  • Zygote / metabolism

Substances

  • Cell Cycle Proteins
  • Chromatin
  • Histones
  • PRM1 protein, human
  • Protamines
  • Transcription Factors
  • SRPK1 protein, human
  • Protamine Kinase
  • Protein Serine-Threonine Kinases