A Viral Exposure Signature Defines Early Onset of Hepatocellular Carcinoma

Cell. 2020 Jul 23;182(2):317-328.e10. doi: 10.1016/j.cell.2020.05.038. Epub 2020 Jun 10.

Abstract

Hepatocellular carcinoma (HCC) is an aggressive malignancy with its global incidence and mortality rate continuing to rise, although early detection and surveillance are suboptimal. We performed serological profiling of the viral infection history in 899 individuals from an NCI-UMD case-control study using a synthetic human virome, VirScan. We developed a viral exposure signature and validated the results in a longitudinal cohort with 173 at-risk patients who had long-term follow-up for HCC development. Our viral exposure signature significantly associated with HCC status among at-risk individuals in the validation cohort (area under the curve: 0.91 [95% CI 0.87-0.96] at baseline and 0.98 [95% CI 0.97-1] at diagnosis). The signature identified cancer patients prior to a clinical diagnosis and was superior to alpha-fetoprotein. In summary, we established a viral exposure signature that can predict HCC among at-risk patients prior to a clinical diagnosis, which may be useful in HCC surveillance.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, N.I.H., Intramural

MeSH terms

  • Adult
  • Aged
  • Area Under Curve
  • Carcinoma, Hepatocellular / genetics
  • Carcinoma, Hepatocellular / metabolism
  • Carcinoma, Hepatocellular / pathology*
  • Case-Control Studies
  • Cohort Studies
  • Databases, Genetic
  • Female
  • Genome-Wide Association Study
  • Humans
  • Linkage Disequilibrium
  • Liver Neoplasms / genetics
  • Liver Neoplasms / metabolism
  • Liver Neoplasms / pathology*
  • Male
  • Middle Aged
  • Polymorphism, Single Nucleotide
  • ROC Curve
  • Risk Factors
  • Virus Diseases / complications
  • Virus Diseases / pathology*
  • Young Adult
  • alpha-Fetoproteins / analysis

Substances

  • alpha-Fetoproteins