Single-cell RNA sequencing of human femoral head in vivo

Aging (Albany NY). 2021 Jun 10;13(11):15595-15619. doi: 10.18632/aging.203124. Epub 2021 Jun 10.

Abstract

The homeostasis of bone metabolism depends on the coupling and precise regulation of various types of cells in bone tissue. However, the communication and interaction between bone tissue cells at the single-cell level remains poorly understood. Thus, we performed single-cell RNA sequencing (scRNA-seq) on the primary human femoral head tissue cells (FHTCs). Nine cell types were identified in 26,574 primary human FHTCs, including granulocytes, T cells, monocytes, B cells, red blood cells, osteoblastic lineage cells, endothelial cells, endothelial progenitor cells (EPCs) and plasmacytoid dendritic cells. We identified serine protease 23 (PRSS23) and matrix remodeling associated protein 8 (MXRA8) as novel bone metabolism-related genes. Additionally, we found that several subtypes of monocytes, T cells and B cells were related to bone metabolism. Cell-cell communication analysis showed that collagen, chemokine, transforming growth factor and their ligands have significant roles in the crosstalks between FHTCs. In particular, EPCs communicated with osteoblastic lineage cells closely via the "COL2A1-ITGB1" interaction pair. Collectively, this study provided an initial characterization of the cellular composition of the human FHTCs and the complex crosstalks between them at the single-cell level. It is a unique starting resource for in-depth insights into bone metabolism.

Keywords: bone cell; bone metabolism; cell-cell communication; immune cell; single-cell RNA sequencing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • B-Lymphocytes / metabolism
  • Cell Lineage / genetics
  • Femur Head / metabolism*
  • Gene Expression Profiling
  • Gene Ontology
  • Gene Regulatory Networks
  • Humans
  • Monocytes / metabolism
  • Osteoblasts / cytology
  • Osteoblasts / metabolism
  • Sequence Analysis, RNA*
  • Single-Cell Analysis*
  • T-Lymphocytes / metabolism