Cardiovirus leader proteins retarget RSK kinases toward alternative substrates to perturb nucleocytoplasmic traffic

PLoS Pathog. 2022 Dec 12;18(12):e1011042. doi: 10.1371/journal.ppat.1011042. eCollection 2022 Dec.

Abstract

Proteins from some unrelated pathogens, including small RNA viruses of the family Picornaviridae, large DNA viruses such as Kaposi sarcoma-associated herpesvirus and even bacteria of the genus Yersinia can recruit cellular p90-ribosomal protein S6 kinases (RSKs) through a common linear motif and maintain the kinases in an active state. On the one hand, pathogens' proteins might hijack RSKs to promote their own phosphorylation (direct target model). On the other hand, some data suggested that pathogens' proteins might dock the hijacked RSKs toward a third interacting partner, thus redirecting the kinase toward a specific substrate. We explored the second hypothesis using the Cardiovirus leader protein (L) as a paradigm. The L protein is known to trigger nucleocytoplasmic trafficking perturbation, which correlates with hyperphosphorylation of phenylalanine-glycine (FG)-nucleoporins (FG-NUPs) such as NUP98. Using a biotin ligase fused to either RSK or L, we identified FG-NUPs as primary partners of the L-RSK complex in infected cells. An L protein mutated in the central RSK-interaction motif was readily targeted to the nuclear envelope whereas an L protein mutated in the C-terminal domain still interacted with RSK but failed to interact with the nuclear envelope. Thus, L uses distinct motifs to recruit RSK and to dock the L-RSK complex toward the FG-NUPs. Using an analog-sensitive RSK2 mutant kinase, we show that, in infected cells, L can trigger RSK to use NUP98 and NUP214 as direct substrates. Our data therefore illustrate a novel virulence mechanism where pathogens' proteins hijack and retarget cellular protein kinases toward specific substrates, to promote their replication or to escape immunity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cardiovirus*
  • Phosphorylation
  • Protein Kinases / metabolism
  • Ribosomal Protein S6 Kinases, 90-kDa / genetics
  • Ribosomal Protein S6 Kinases, 90-kDa / metabolism

Substances

  • Ribosomal Protein S6 Kinases, 90-kDa
  • Protein Kinases

Grants and funding

BLP and CL were the recipients of FRIA fellowship from the belgian FNRS. Work was supported by the EOS joint programme of Fonds de la recherche scientifique-FNRS and Fonds wetenschappelijk onderzoek-Vlaanderen-FWO (EOS ID: 30981113 and 40007527), Belgian fund for Scientific Research (PDR T.0185.14), Loterie Nationale through support to the de Duve Institute and Actions de Recherches Concertées (ARC) to TM. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.