A Web Application for Predicting Drug Combination Efficacy Using Monotherapy Data and IDACombo

J Cancer Sci Clin Ther. 2024;7(4):253-258. doi: 10.26502/jcsct.5079218. Epub 2023 Dec 8.

Abstract

We recently reported a computational method (IDACombo) designed to predict the efficacy of cancer drug combinations using monotherapy response data and the assumptions of independent drug action. Given the strong agreement between IDACombo predictions and measured drug combination efficacy in vitro and in clinical trials, we believe IDACombo can be of immediate use to researchers who are working to develop novel drug combinations. While we previously released our method as an R package, we have now created an R Shiny application to allow researchers without programming experience to easily utilize this method. The app provides a graphical interface which enables users to easily generate efficacy predictions with IDACombo using provided data from several high-throughput cell line screens or using custom, user-provided data.

Keywords: Cancer; Computational biology; Drug combinations; Drug repurposing; High-throughput drug screens; IDACombo; Independent drug action.