Integrated miRNA-mRNA Analysis Reveals Critical miRNAs and Targets in Diet-Induced Obesity-Related Glomerulopathy

Int J Mol Sci. 2024 Jun 11;25(12):6437. doi: 10.3390/ijms25126437.

Abstract

This study aimed to investigate obesity-related glomerulopathy (ORG) at cellular, structural, and transcriptomic levels. Thirty Wistar rats were randomized into two groups: 15 rats were fed with a standard diet (SD-rats), and 15 rats were fed with a high-fat diet (HFD-rats). After 10 weeks, the weight, kidney function, histological features, and transcriptomic changes were assessed. HFD-rats gained significantly more weight (55.8% vs. 29.2%; p < 0.001) and albuminuria (10,384.04 ng/mL vs. 5845.45 ng/mL; p < 0.001) compared to SD-rats. HFD-rats exhibited early stages of ORG, with predominant mesangial matrix increase and podocyte hypertrophy (PH). These lesions correlated with differentially expressed (DE) genes and miRNAs. Functional analysis showed that miR-205, which was DE in both the kidneys and urine of HFD-rats, negatively regulated the PTEN gene, promoting lipid endocytosis in podocytes. The downregulation of PTEN was proved through a higher PTEN/nephrin ratio in the SD-rats and the presence of lipid vacuoles in HFD-podocytes. This study has found a specific targetome of miRNAs and gene expression in early stages of ORG. Also, it emphasizes the potential value of miR-205 as a urinary biomarker for detecting podocyte injury in ORG, offering a tool for early diagnosis, and opening new avenues for future therapeutic research of obesity-related glomerulopathy.

Keywords: Wistar rats; biomarker; mesangial matrix increase; microRNA; obesity-related glomerulopathy; podocyte hypertrophy; targetome.

MeSH terms

  • Animals
  • Diet, High-Fat* / adverse effects
  • Gene Expression Profiling / methods
  • Gene Expression Regulation
  • Kidney Diseases / etiology
  • Kidney Diseases / genetics
  • Kidney Diseases / metabolism
  • Kidney Diseases / pathology
  • Male
  • MicroRNAs* / genetics
  • Obesity* / complications
  • Obesity* / genetics
  • Obesity* / metabolism
  • PTEN Phosphohydrolase / genetics
  • PTEN Phosphohydrolase / metabolism
  • Podocytes* / metabolism
  • Podocytes* / pathology
  • RNA, Messenger* / genetics
  • RNA, Messenger* / metabolism
  • Rats
  • Rats, Wistar*
  • Transcriptome

Substances

  • MicroRNAs
  • RNA, Messenger
  • PTEN Phosphohydrolase