A dataset of hidden small non-coding RNA in the testis of heat-stressed models revealed by Pandora-seq

Sci Data. 2024 Jul 9;11(1):747. doi: 10.1038/s41597-024-03612-6.

Abstract

Infertility, a worldwide reproductive health concern, impacts approximately one in five couples. Male infertility, stemming from spermatogenic dysfunction and reduced sperm quality, stands as a primary factor contributing to infertility. Given the global decrease in male fertility linked to environmental factors like the greenhouse effect, it is crucial to develop a comprehensive understanding of how increased temperatures impact both the quantity and quality of sperm. In this study, we utilized Pandora-seq technology to detect the small non-coding RNAs (sncRNAs) expression profile in the testicular tissue of heat-stressed mice. The investigation explores the dynamic shifts in sncRNAs within the mouse testis under heat stress, including miRNAs, tsRNAs, piRNAs, rsRNAs and other sncRNAs. Furthermore, we successfully identified differentially expressed sncRNAs in testicular tissues before and after heat stress. Subsequently, we conducted functional enrichment analysis on the potential predicted target genes of differentially expressed miRNAs and tsRNAs. These datasets will constitute a valuable foundational resource for further investigations into the decline in male reproductive capacity triggered by heat stress.

MeSH terms

  • Animals
  • Heat-Shock Response*
  • Infertility, Male / genetics
  • Male
  • Mice
  • MicroRNAs / genetics
  • RNA, Small Untranslated* / genetics
  • Testis* / metabolism

Substances

  • MicroRNAs
  • RNA, Small Untranslated