The quest to identify ADP-ribosylation readers: methodological advances

Trends Biochem Sci. 2024 Nov;49(11):1000-1013. doi: 10.1016/j.tibs.2024.08.006. Epub 2024 Sep 19.

Abstract

ADP-ribosylation regulates numerous fundamental cellular processes in health and disease. However, the limited availability of suitable tools and methods prevents the identification and characterization of certain components of the ADP-ribosylation signaling network and, consequently, efficient utilization of their biomedical potential. Identification of ADP-ribose (ADPr) readers has been particularly impeded by challenges associated with the development of ADPr-based enrichment probes. These difficulties were finally overcome in several recent studies describing various approaches to identifying ADPr readers in an unbiased, proteome-wide manner. In this review we discuss these different strategies and their limitations, benefits and drawbacks, and summarize how these technologies contribute to a dissection of ADP-ribosylation signaling networks. We also address unmet technological needs and future directions to investigate interactions with ADPr linkages.

Keywords: ADP-ribosylation; ADPr readers; PARP; chemical biology; interaction proteomics; mass spectrometry.

Publication types

  • Review

MeSH terms

  • ADP-Ribosylation*
  • Adenosine Diphosphate Ribose / metabolism
  • Animals
  • Humans
  • Proteomics / methods
  • Signal Transduction

Substances

  • Adenosine Diphosphate Ribose