Crystal structure of an integrin-binding fragment of vascular cell adhesion molecule-1 at 1.8 A resolution

Nature. 1995 Feb 9;373(6514):539-44. doi: 10.1038/373539a0.

Abstract

The cell-surface glycoprotein vascular cell adhesion molecule-1 (VCAM-1; ref. 1) mediates intercellular adhesion by specific binding to the integrin very-late antigen-4 (VLA-4, alpha 4 beta 1; ref. 3). VCAM-1, with the intercellular adhesion molecules ICAM-1, ICAM-2, ICAM-3 and the mucosal vascular addressin MAd-CAM-1, forms an integrin-binding subgroup of the immunoglobulin superfamily. In addition to their clinical relevance in inflammation, these molecules act as cellular receptors for viral and parasitic agents. The predominant form of VCAM-1 in vivo has an amino-terminal extracellular region comprising seven immunoglobulin-like domains. Functional studies have identified a conserved integrin-binding motif in domains 1 and 4, variants of which are present in the N-terminal domain of all members of the immunoglobulin superfamily subgroup. We report here the crystal structure of a VLA-4-binding fragment composed of the first two domains of VCAM-1. The integrin-binding motif (Q38IDSPL) is highly exposed and forms the N-terminal region of the loop between beta-strands C and D of domain 1. This motif exhibits a distinctive conformation which we predict will be common to all the integrin-binding IgSF molecules. These, and additional data, map VLA-4 binding to the face of the CFG beta-sheet, the surface previously identified as the site for intercellular adhesive interactions between members of the immunoglobulin superfamily.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Binding Sites
  • CD2 Antigens / chemistry
  • CD2 Antigens / metabolism
  • Cell Adhesion Molecules / chemistry*
  • Cell Adhesion Molecules / genetics
  • Cell Adhesion Molecules / metabolism
  • Computer Graphics
  • Crystallography, X-Ray
  • Escherichia coli
  • Humans
  • Molecular Sequence Data
  • Mutagenesis
  • Protein Conformation
  • Protein Structure, Secondary
  • Receptors, Very Late Antigen / metabolism*
  • Recombinant Proteins
  • Sequence Homology, Amino Acid
  • Vascular Cell Adhesion Molecule-1

Substances

  • CD2 Antigens
  • Cell Adhesion Molecules
  • Receptors, Very Late Antigen
  • Recombinant Proteins
  • Vascular Cell Adhesion Molecule-1