Arcobacter-specific and Arcobacter butzleri-specific 16S rRNA-based DNA probes

J Clin Microbiol. 1995 Jul;33(7):1691-8. doi: 10.1128/jcm.33.7.1691-1698.1995.

Abstract

The genus Arcobacter encompasses gram-negative, aerotolerant, spiral-shaped bacteria formerly designated Campylobacter cryaerophila. Two genus-specific 16S rRNA-based oligonucleotide DNA probes (23-mer and 27-mer) were developed. The probes hybridized with strains of Arcobacter butzleri (n = 58), Arcobacter cryaerophilus (n = 19), and Arcobacter skirrowii (n = 17). The probes did not cross-react with any of the reference strains of Campylobacter, Helicobacter, including "Flexispira rappini," or Wolinella. The 27-mer hybridized with 61 Arcobacter spp. field isolates originating from late-term aborted porcine (n = 54) and equine (n = 2) fetuses and humans with enteritis (n = 5). The species of Arcobacter isolates (n = 56) recovered from aborted livestock fetuses were determined by ribotyping and were as follows: A. cryaerophilus group 1A (11 of 56; 20%), A. cryaerophilus group 1B (37 of 56; 66%), A. butzleri (5 of 56; 9%), and unknown (3 of 56; 5%). The five human field strains were identified as A. butzleri. A species-specific DNA probe (24-mer) for A. butzleri was also developed since there is evidence that this organism may be a human pathogen. This probe hybridized with previously characterized strains of A. butzleri (n = 58), with 10 field strains identified as A. butzleri by ribotyping and with 2 strains having an indeterminate ribotype. The A. butzleri-specific probe did not cross-react with strains of A. skirrowii (n = 17) and A. cryaerophilus (n = 19).

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Animals
  • Base Sequence
  • Campylobacter / classification
  • Campylobacter / genetics*
  • Campylobacter / pathogenicity
  • DNA Probes / genetics*
  • Enteritis / microbiology
  • Female
  • Gram-Negative Bacteria / classification
  • Gram-Negative Bacteria / genetics*
  • Gram-Negative Bacteria / pathogenicity
  • Gram-Negative Bacterial Infections / microbiology
  • Gram-Negative Bacterial Infections / veterinary
  • Helicobacter / classification
  • Helicobacter / genetics
  • Horse Diseases / microbiology
  • Horses
  • Humans
  • Male
  • Molecular Sequence Data
  • Phylogeny
  • Pregnancy
  • RNA, Bacterial / genetics*
  • RNA, Ribosomal, 16S / genetics*
  • Species Specificity
  • Swine
  • Swine Diseases / microbiology

Substances

  • DNA Probes
  • RNA, Bacterial
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/L04312
  • GENBANK/L04313
  • GENBANK/L04314
  • GENBANK/L04315
  • GENBANK/L04316
  • GENBANK/L04317
  • GENBANK/L04318
  • GENBANK/L04319
  • GENBANK/L04320
  • GENBANK/L04321
  • GENBANK/L04322
  • GENBANK/L06974
  • GENBANK/L06978
  • GENBANK/L14625
  • GENBANK/L14627
  • GENBANK/L14628
  • GENBANK/L14630
  • GENBANK/L14631
  • GENBANK/M35048
  • GENBANK/M65010
  • GENBANK/M88157
  • GENBANK/M88159
  • GENBANK/U25805