Nucleotide sequence and molecular analysis of the rhesus cytomegalovirus immediate-early gene and the UL121-117 open reading frames

Virology. 1996 Jan 1;215(1):61-72. doi: 10.1006/viro.1996.0007.

Abstract

Cytomegalovirus (CMV) has been isolated from many nonhuman primates, including rhesus macaques (Macaca mulatta). To better understand the molecular biology of rhesus CMV (RhCMV), a 9.2-kb DNA restriction fragment spanning the immediate-early (IE) gene has been molecularly cloned and sequenced. Open reading frames (ORF) have been identified and transcripts mapped for regions corresponding to exons 1, 2, 3, and 4 of the IE1 protein of human CMV (HCMV) and to exons 1, 2, 3, and 5 of IE2. The predicted RhCMV IE1 protein was 29 and 40% identical with the HCMV and African green monkey (AGM) CMV IE1 proteins, respectively, and the predicted RhCMV IE2 protein was 48 and 65% identical with the HCMV and AGM CMV IE2 proteins, respectively. Five additional ORF 3' to the RhCMV IE gene were identified which contained significant homologies with the HCMV UL121-UL117 ORF. The predicted translation products ranged from 29 to 47% identical with, and 52 to 66% similarity to the corresponding ORF of HCMV. Conservation of nucleic and amino acid sequences, and colinearity of genes, between primate CMV genomes contribute to a better understanding of primate CMV evolution, regulation, and pathogenesis.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Binding Sites
  • Chromosome Mapping
  • Cytomegalovirus / genetics*
  • DNA, Viral
  • Exons
  • Humans
  • Immediate-Early Proteins / genetics*
  • Introns
  • Macaca mulatta
  • Molecular Sequence Data
  • Open Reading Frames*
  • Protein Biosynthesis
  • Sequence Homology, Amino Acid
  • Tumor Cells, Cultured
  • Viral Proteins*

Substances

  • DNA, Viral
  • IE1 protein, cytomegalovirus
  • Immediate-Early Proteins
  • Viral Proteins

Associated data

  • GENBANK/M93360