Conservation of position and sequence of a novel, widely expressed gene containing the major human alpha-globin regulatory element

Genomics. 1995 Oct 10;29(3):679-89. doi: 10.1006/geno.1995.9951.

Abstract

We have determined the cDNA and genomic structure of a gene (-14 gene) that lies adjacent to the human alpha-globin cluster. Although it is expressed in a wide range of cell lines and tissues, a previously described erythroid-specific regulatory element that controls expression of the alpha-globin genes lies within intron 5 of this gene. Analysis of the -14 gene promoter shows that it is GC rich and associated with a constitutively expressed DNase 1 hypersensitive site; unlike the alpha-globin promoter, it does not contain a TATA or CCAAT box. These and other differences in promoter structure may explain why the erythroid regulatory element interacts specifically with the alpha-globin promoters and not the -14 gene promoter, which lies between the alpha promoters and their regulatory element. Interspecies comparisons demonstrate that the sequence and location of the -14 gene adjacent to the alpha cluster have been maintained since the bird/mammal divergence, 270 million years ago.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Composition
  • Base Sequence
  • Biological Evolution*
  • Birds
  • Cell Line
  • Chickens
  • Conserved Sequence
  • DNA Primers
  • DNA, Complementary
  • Exons
  • Gene Expression Regulation*
  • Globins / biosynthesis
  • Globins / genetics*
  • Humans
  • Introns
  • Mammals
  • Molecular Sequence Data
  • Multigene Family*
  • Polymerase Chain Reaction
  • Promoter Regions, Genetic*
  • Recombinant Proteins / biosynthesis
  • Regulatory Sequences, Nucleic Acid*
  • Sequence Homology, Nucleic Acid
  • TATA Box
  • Transfection
  • Tumor Cells, Cultured

Substances

  • DNA Primers
  • DNA, Complementary
  • Recombinant Proteins
  • Globins

Associated data

  • GENBANK/M58748
  • GENBANK/T08612
  • GENBANK/X90857