Lundegaard C - Search Results

1

Prediction of protein secondary structure at 80% accuracy.

Petersen TN, Lundegaard C, Nielsen M, Bohr H, Bohr J, Brunak S, Gippert GP, Lund O. Petersen TN, et al. Among authors: lundegaard c. Proteins. 2000 Oct 1;41(1):17-20. Proteins. 2000. PMID: 10944389

2

Reliable prediction of T-cell epitopes using neural networks with novel sequence representations.

Nielsen M, Lundegaard C, Worning P, Lauemøller SL, Lamberth K, Buus S, Brunak S, Lund O. Nielsen M, et al. Among authors: lundegaard c. Protein Sci. 2003 May;12(5):1007-17. doi: 10.1110/ps.0239403. Protein Sci. 2003. PMID: 12717023 Free PMC article.

3

A generic method for assignment of reliability scores applied to solvent accessibility predictions.

Petersen B, Petersen TN, Andersen P, Nielsen M, Lundegaard C. Petersen B, et al. Among authors: lundegaard c. BMC Struct Biol. 2009 Jul 31;9:51. doi: 10.1186/1472-6807-9-51. BMC Struct Biol. 2009. PMID: 19646261 Free PMC article.

4

Prediction of epitopes using neural network based methods.

Lundegaard C, Lund O, Nielsen M. Lundegaard C, et al. J Immunol Methods. 2011 Nov 30;374(1-2):26-34. doi: 10.1016/j.jim.2010.10.011. Epub 2010 Oct 31. J Immunol Methods. 2011. PMID: 21047511 Free PMC article.

5

NetTurnP--neural network prediction of beta-turns by use of evolutionary information and predicted protein sequence features.

Petersen B, Lundegaard C, Petersen TN. Petersen B, et al. Among authors: lundegaard c. PLoS One. 2010 Nov 30;5(11):e15079. doi: 10.1371/journal.pone.0015079. PLoS One. 2010. PMID: 21152409 Free PMC article.

6

Selecting informative data for developing peptide-MHC binding predictors using a query by committee approach.

Christensen JK, Lamberth K, Nielsen M, Lundegaard C, Worning P, Lauemøller SL, Buus S, Brunak S, Lund O. Christensen JK, et al. Among authors: lundegaard c. Neural Comput. 2003 Dec;15(12):2931-42. doi: 10.1162/089976603322518803. Neural Comput. 2003. PMID: 14629874

7

Prediction of MHC class II binding affinity using SMM-align, a novel stabilization matrix alignment method.

Nielsen M, Lundegaard C, Lund O. Nielsen M, et al. Among authors: lundegaard c. BMC Bioinformatics. 2007 Jul 4;8:238. doi: 10.1186/1471-2105-8-238. BMC Bioinformatics. 2007. PMID: 17608956 Free PMC article.

8

CPHmodels-3.0--remote homology modeling using structure-guided sequence profiles.

Nielsen M, Lundegaard C, Lund O, Petersen TN. Nielsen M, et al. Among authors: lundegaard c. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W576-81. doi: 10.1093/nar/gkq535. Epub 2010 Jun 11. Nucleic Acids Res. 2010. PMID: 20542909 Free PMC article.

9

Improved prediction of MHC class I and class II epitopes using a novel Gibbs sampling approach.

Nielsen M, Lundegaard C, Worning P, Hvid CS, Lamberth K, Buus S, Brunak S, Lund O. Nielsen M, et al. Among authors: lundegaard c. Bioinformatics. 2004 Jun 12;20(9):1388-97. doi: 10.1093/bioinformatics/bth100. Epub 2004 Feb 12. Bioinformatics. 2004. PMID: 14962912

10

SARS CTL vaccine candidates; HLA supertype-, genome-wide scanning and biochemical validation.

Sylvester-Hvid C, Nielsen M, Lamberth K, Røder G, Justesen S, Lundegaard C, Worning P, Thomadsen H, Lund O, Brunak S, Buus S. Sylvester-Hvid C, et al. Among authors: lundegaard c. Tissue Antigens. 2004 May;63(5):395-400. doi: 10.1111/j.0001-2815.2004.00221.x. Tissue Antigens. 2004. PMID: 15104671 Free PMC article.

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