Church GM - Search Results

1

A dynamic programming approach to de novo peptide sequencing via tandem mass spectrometry.

Chen T, Kao MY, Tepel M, Rush J, Church GM. Chen T, et al. Among authors: church gm. J Comput Biol. 2001;8(3):325-37. doi: 10.1089/10665270152530872. J Comput Biol. 2001. PMID: 11535179

2

Alignment and structure prediction of divergent protein families: periplasmic and outer membrane proteins of bacterial efflux pumps.

Johnson JM, Church GM. Johnson JM, et al. Among authors: church gm. J Mol Biol. 1999 Apr 2;287(3):695-715. doi: 10.1006/jmbi.1999.2630. J Mol Biol. 1999. PMID: 10092468

3

Modeling gene expression with differential equations.

Chen T, He HL, Church GM. Chen T, et al. Among authors: church gm. Pac Symp Biocomput. 1999:29-40. Pac Symp Biocomput. 1999. PMID: 10380183 Free article.

4

Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae.

Hughes JD, Estep PW, Tavazoie S, Church GM. Hughes JD, et al. Among authors: church gm. J Mol Biol. 2000 Mar 10;296(5):1205-14. doi: 10.1006/jmbi.2000.3519. J Mol Biol. 2000. PMID: 10698627

5

Algorithms for identifying protein cross-links via tandem mass spectrometry.

Chen T, Jaffe JD, Church GM. Chen T, et al. Among authors: church gm. J Comput Biol. 2001;8(6):571-83. doi: 10.1089/106652701753307494. J Comput Biol. 2001. PMID: 11747613

6

Discrimination between paralogs using microarray analysis: application to the Yap1p and Yap2p transcriptional networks.

Cohen BA, Pilpel Y, Mitra RD, Church GM. Cohen BA, et al. Among authors: church gm. Mol Biol Cell. 2002 May;13(5):1608-14. doi: 10.1091/mbc.01-10-0472. Mol Biol Cell. 2002. PMID: 12006656 Free PMC article.

7

Computational identification of transcription factor binding sites via a transcription-factor-centric clustering (TFCC) algorithm.

Zhu Z, Pilpel Y, Church GM. Zhu Z, et al. Among authors: church gm. J Mol Biol. 2002 Apr 19;318(1):71-81. doi: 10.1016/S0022-2836(02)00026-8. J Mol Biol. 2002. PMID: 12054769

8

Computational and experimental identification of C. elegans microRNAs.

Grad Y, Aach J, Hayes GD, Reinhart BJ, Church GM, Ruvkun G, Kim J. Grad Y, et al. Among authors: church gm. Mol Cell. 2003 May;11(5):1253-63. doi: 10.1016/s1097-2765(03)00153-9. Mol Cell. 2003. PMID: 12769849 Free article.

9

MapQuant: open-source software for large-scale protein quantification.

Leptos KC, Sarracino DA, Jaffe JD, Krastins B, Church GM. Leptos KC, et al. Among authors: church gm. Proteomics. 2006 Mar;6(6):1770-82. doi: 10.1002/pmic.200500201. Proteomics. 2006. PMID: 16470651

10

Electrophore mass tag dideoxy DNA sequencing.

Xu L, Bian N, Wang Z, Abdel-Baky S, Pillai S, Magiera D, Murugaiah V, Giese RW, Wang P, O'Keeffe T, Abushamaa H, Kutney L, Church G, Carson S, Smith D, Park M, Wronka J, Laukien F. Xu L, et al. Anal Chem. 1997 Sep 1;69(17):3595-602. doi: 10.1021/ac970066l. Anal Chem. 1997. PMID: 9286165

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