Dudley AM - Search Results

1

Measuring absolute expression with microarrays with a calibrated reference sample and an extended signal intensity range.

Dudley AM, Aach J, Steffen MA, Church GM. Dudley AM, et al. Proc Natl Acad Sci U S A. 2002 May 28;99(11):7554-9. doi: 10.1073/pnas.112683499. Proc Natl Acad Sci U S A. 2002. PMID: 12032321 Free PMC article.

2

A global view of pleiotropy and phenotypically derived gene function in yeast.

Dudley AM, Janse DM, Tanay A, Shamir R, Church GM. Dudley AM, et al. Mol Syst Biol. 2005;1:2005.0001. doi: 10.1038/msb4100004. Epub 2005 Mar 29. Mol Syst Biol. 2005. PMID: 16729036 Free PMC article.

3

Identifying regulatory mechanisms using individual variation reveals key role for chromatin modification.

Lee SI, Pe'er D, Dudley AM, Church GM, Koller D. Lee SI, et al. Among authors: dudley am. Proc Natl Acad Sci U S A. 2006 Sep 19;103(38):14062-7. doi: 10.1073/pnas.0601852103. Epub 2006 Sep 12. Proc Natl Acad Sci U S A. 2006. PMID: 16968785 Free PMC article.

4

Predicting phenotype from patterns of annotation.

King OD, Lee JC, Dudley AM, Janse DM, Church GM, Roth FP. King OD, et al. Among authors: dudley am. Bioinformatics. 2003;19 Suppl 1:i183-9. doi: 10.1093/bioinformatics/btg1024. Bioinformatics. 2003. PMID: 12855456

5

Model-driven analysis of experimentally determined growth phenotypes for 465 yeast gene deletion mutants under 16 different conditions.

Snitkin ES, Dudley AM, Janse DM, Wong K, Church GM, Segrè D. Snitkin ES, et al. Among authors: dudley am. Genome Biol. 2008;9(9):R140. doi: 10.1186/gb-2008-9-9-r140. Epub 2008 Sep 22. Genome Biol. 2008. PMID: 18808699 Free PMC article.

6

Specific components of the SAGA complex are required for Gcn4- and Gcr1-mediated activation of the his4-912delta promoter in Saccharomyces cerevisiae.

Dudley AM, Gansheroff LJ, Winston F. Dudley AM, et al. Genetics. 1999 Apr;151(4):1365-78. doi: 10.1093/genetics/151.4.1365. Genetics. 1999. PMID: 10101163 Free PMC article.

7

Aneuploidy underlies a multicellular phenotypic switch.

Tan Z, Hays M, Cromie GA, Jeffery EW, Scott AC, Ahyong V, Sirr A, Skupin A, Dudley AM. Tan Z, et al. Among authors: dudley am. Proc Natl Acad Sci U S A. 2013 Jul 23;110(30):12367-72. doi: 10.1073/pnas.1301047110. Epub 2013 Jun 28. Proc Natl Acad Sci U S A. 2013. PMID: 23812752 Free PMC article.

8

The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo.

Dudley AM, Rougeulle C, Winston F. Dudley AM, et al. Genes Dev. 1999 Nov 15;13(22):2940-5. doi: 10.1101/gad.13.22.2940. Genes Dev. 1999. PMID: 10580001 Free PMC article.

9

Identification and analysis of Mot3, a zinc finger protein that binds to the retrotransposon Ty long terminal repeat (delta) in Saccharomyces cerevisiae.

Madison JM, Dudley AM, Winston F. Madison JM, et al. Among authors: dudley am. Mol Cell Biol. 1998 Apr;18(4):1879-90. doi: 10.1128/MCB.18.4.1879. Mol Cell Biol. 1998. PMID: 9528759 Free PMC article.

10

Learning a prior on regulatory potential from eQTL data.

Lee SI, Dudley AM, Drubin D, Silver PA, Krogan NJ, Pe'er D, Koller D. Lee SI, et al. Among authors: dudley am. PLoS Genet. 2009 Jan;5(1):e1000358. doi: 10.1371/journal.pgen.1000358. Epub 2009 Jan 30. PLoS Genet. 2009. PMID: 19180192 Free PMC article.

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